Hb_009778_050

Information

Type -
Description -
Location Contig9778: 49741-61735
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID KDP46929.1
description hypothetical protein JCGZ_08917 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067LQQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08917 PE=4 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64227: 50468-50734 , PASA_asmbl_64229: 62716-66389
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009778_050 0.0 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
2 Hb_150730_010 0.0770289921 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
3 Hb_004079_110 0.094789583 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
4 Hb_002003_030 0.0956446203 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
5 Hb_001723_070 0.107861537 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
6 Hb_116469_010 0.1154898488 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
7 Hb_011861_020 0.1167308319 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
8 Hb_000057_180 0.1277472844 - - hypothetical protein POPTR_0001s18200g [Populus trichocarpa]
9 Hb_001660_040 0.1300609405 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
10 Hb_000471_010 0.1315088823 - - ATP binding protein, putative [Ricinus communis]
11 Hb_002110_060 0.1336224323 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
12 Hb_162286_030 0.1363708917 - - PREDICTED: uncharacterized protein LOC105650163 [Jatropha curcas]
13 Hb_111985_160 0.1384770122 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
14 Hb_000288_140 0.141043308 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 35 [Jatropha curcas]
15 Hb_008554_090 0.1411225101 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000684_490 0.1418309849 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
17 Hb_000005_350 0.1469697219 - - PREDICTED: uncharacterized protein LOC105634263 [Jatropha curcas]
18 Hb_010174_170 0.1493691592 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]
19 Hb_004586_110 0.1512602628 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
20 Hb_000220_170 0.1534061636 - - -

Gene co-expression network

sample Hb_009778_050 Hb_009778_050 Hb_150730_010 Hb_150730_010 Hb_009778_050--Hb_150730_010 Hb_004079_110 Hb_004079_110 Hb_009778_050--Hb_004079_110 Hb_002003_030 Hb_002003_030 Hb_009778_050--Hb_002003_030 Hb_001723_070 Hb_001723_070 Hb_009778_050--Hb_001723_070 Hb_116469_010 Hb_116469_010 Hb_009778_050--Hb_116469_010 Hb_011861_020 Hb_011861_020 Hb_009778_050--Hb_011861_020 Hb_150730_010--Hb_011861_020 Hb_000057_180 Hb_000057_180 Hb_150730_010--Hb_000057_180 Hb_150730_010--Hb_002003_030 Hb_150730_010--Hb_116469_010 Hb_000471_010 Hb_000471_010 Hb_150730_010--Hb_000471_010 Hb_006949_030 Hb_006949_030 Hb_004079_110--Hb_006949_030 Hb_001660_040 Hb_001660_040 Hb_004079_110--Hb_001660_040 Hb_004079_110--Hb_001723_070 Hb_001621_020 Hb_001621_020 Hb_004079_110--Hb_001621_020 Hb_001609_080 Hb_001609_080 Hb_004079_110--Hb_001609_080 Hb_002003_030--Hb_116469_010 Hb_002003_030--Hb_000057_180 Hb_002003_030--Hb_011861_020 Hb_002003_030--Hb_000471_010 Hb_162286_030 Hb_162286_030 Hb_001723_070--Hb_162286_030 Hb_010174_170 Hb_010174_170 Hb_001723_070--Hb_010174_170 Hb_002110_060 Hb_002110_060 Hb_001723_070--Hb_002110_060 Hb_001723_070--Hb_001621_020 Hb_116469_010--Hb_011861_020 Hb_028927_010 Hb_028927_010 Hb_116469_010--Hb_028927_010 Hb_116469_010--Hb_000057_180 Hb_000005_350 Hb_000005_350 Hb_116469_010--Hb_000005_350 Hb_011861_020--Hb_000471_010 Hb_011861_020--Hb_000005_350 Hb_011861_020--Hb_000057_180 Hb_000684_490 Hb_000684_490 Hb_011861_020--Hb_000684_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.148017 0.22707 0.0968184 0.00650929 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.514111 0.0386507

CAGE analysis