Hb_009785_030

Information

Type transcription factor
Description TF Family: NAC
Location Contig9785: 15576-16557
Sequence    

Annotation

kegg
ID rcu:RCOM_1504850
description transcription factor, putative
nr
ID XP_012090627.1
description PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
swissprot
ID Q52QH4
description NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1
trembl
ID R4NEP6
description NAC transcription factor 010 OS=Jatropha curcas GN=JCGZ_26399 PE=4 SV=1
Gene Ontology
ID GO:0003677
description nac domain-containing protein 29

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009785_030 0.0 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
2 Hb_000345_550 0.086661905 - - PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]
3 Hb_009783_010 0.0909341147 - - PREDICTED: sulfated surface glycoprotein 185-like [Populus euphratica]
4 Hb_000012_350 0.09161877 transcription factor TF Family: HB PREDICTED: homeobox protein ATH1 [Jatropha curcas]
5 Hb_002874_200 0.0933699457 - - PREDICTED: uncharacterized protein LOC105109832 [Populus euphratica]
6 Hb_007904_280 0.0943192179 - - PREDICTED: uncharacterized protein LOC105644987 [Jatropha curcas]
7 Hb_012132_050 0.0993964164 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
8 Hb_000827_020 0.1028287966 - - unnamed protein product [Coffea canephora]
9 Hb_002388_070 0.1038528258 - - ring finger protein, putative [Ricinus communis]
10 Hb_000395_310 0.1040489595 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
11 Hb_001408_080 0.104971969 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
12 Hb_000849_030 0.1055833443 - - PREDICTED: fimbrin-2 [Jatropha curcas]
13 Hb_005741_030 0.1059566187 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
14 Hb_000000_050 0.1090364989 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000620_040 0.1094262414 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
16 Hb_000680_060 0.110033112 - - hypothetical protein POPTR_0001s20790g [Populus trichocarpa]
17 Hb_002053_190 0.1127426791 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
18 Hb_000261_070 0.1132271645 - - PREDICTED: F-box/kelch-repeat protein At3g06240-like [Jatropha curcas]
19 Hb_000230_410 0.1135990228 - - PREDICTED: uncharacterized protein LOC105631891 [Jatropha curcas]
20 Hb_003893_130 0.1141952538 - - metal ion binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_009785_030 Hb_009785_030 Hb_000345_550 Hb_000345_550 Hb_009785_030--Hb_000345_550 Hb_009783_010 Hb_009783_010 Hb_009785_030--Hb_009783_010 Hb_000012_350 Hb_000012_350 Hb_009785_030--Hb_000012_350 Hb_002874_200 Hb_002874_200 Hb_009785_030--Hb_002874_200 Hb_007904_280 Hb_007904_280 Hb_009785_030--Hb_007904_280 Hb_012132_050 Hb_012132_050 Hb_009785_030--Hb_012132_050 Hb_005784_010 Hb_005784_010 Hb_000345_550--Hb_005784_010 Hb_001951_080 Hb_001951_080 Hb_000345_550--Hb_001951_080 Hb_000345_550--Hb_009783_010 Hb_009023_010 Hb_009023_010 Hb_000345_550--Hb_009023_010 Hb_000345_550--Hb_007904_280 Hb_009783_010--Hb_007904_280 Hb_001898_040 Hb_001898_040 Hb_009783_010--Hb_001898_040 Hb_009783_010--Hb_012132_050 Hb_001136_040 Hb_001136_040 Hb_009783_010--Hb_001136_040 Hb_001136_160 Hb_001136_160 Hb_009783_010--Hb_001136_160 Hb_007185_050 Hb_007185_050 Hb_009783_010--Hb_007185_050 Hb_001794_040 Hb_001794_040 Hb_000012_350--Hb_001794_040 Hb_011574_020 Hb_011574_020 Hb_000012_350--Hb_011574_020 Hb_010164_030 Hb_010164_030 Hb_000012_350--Hb_010164_030 Hb_020738_010 Hb_020738_010 Hb_000012_350--Hb_020738_010 Hb_001427_100 Hb_001427_100 Hb_000012_350--Hb_001427_100 Hb_000827_020 Hb_000827_020 Hb_000012_350--Hb_000827_020 Hb_000230_410 Hb_000230_410 Hb_002874_200--Hb_000230_410 Hb_002388_070 Hb_002388_070 Hb_002874_200--Hb_002388_070 Hb_004032_290 Hb_004032_290 Hb_002874_200--Hb_004032_290 Hb_000395_310 Hb_000395_310 Hb_002874_200--Hb_000395_310 Hb_002874_200--Hb_007185_050 Hb_002874_200--Hb_001136_040 Hb_007904_280--Hb_012132_050 Hb_004223_060 Hb_004223_060 Hb_007904_280--Hb_004223_060 Hb_000878_050 Hb_000878_050 Hb_007904_280--Hb_000878_050 Hb_007904_280--Hb_001136_160 Hb_007904_280--Hb_000012_350 Hb_012132_050--Hb_001898_040 Hb_012132_050--Hb_001136_160 Hb_001408_080 Hb_001408_080 Hb_012132_050--Hb_001408_080 Hb_003466_010 Hb_003466_010 Hb_012132_050--Hb_003466_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0875157 0.820349 1.54834 4.23502 0.0674356 0.0452579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.102464 1.86996

CAGE analysis