Hb_009847_010

Information

Type -
Description -
Location Contig9847: 14924-19329
Sequence    

Annotation

kegg
ID pop:POPTR_0018s12250g
description POPTRDRAFT_825983; hypothetical protein
nr
ID XP_012081107.1
description PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1T5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16963 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009847_010 0.0 - - PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]
2 Hb_000556_060 0.0281716735 - - hypothetical protein OsJ_28181 [Oryza sativa Japonica Group]
3 Hb_000847_090 0.0538984623 - - PREDICTED: uncharacterized protein LOC105644263 isoform X1 [Jatropha curcas]
4 Hb_024071_030 0.0653534054 - - hypothetical protein CICLE_v10025479mg [Citrus clementina]
5 Hb_007044_240 0.0667324225 - - PREDICTED: uncharacterized protein LOC105638704 isoform X1 [Jatropha curcas]
6 Hb_000127_240 0.0738527204 - - SAUR39 [Populus tomentosa]
7 Hb_000375_220 0.07511323 - - RecName: Full=2-methylbutanal oxime monooxygenase; AltName: Full=Cytochrome P450 71E7 [Manihot esculenta]
8 Hb_000676_360 0.0758578513 - - hypothetical protein POPTR_0007s13690g [Populus trichocarpa]
9 Hb_002307_140 0.0788572785 transcription factor TF Family: AUX/IAA aux/IAA family protein [Populus trichocarpa]
10 Hb_031022_030 0.0789744893 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7-like [Jatropha curcas]
11 Hb_002030_010 0.0790763864 - - hypothetical protein JCGZ_18681 [Jatropha curcas]
12 Hb_009663_020 0.0797107841 - - -
13 Hb_006711_030 0.082745617 - - PREDICTED: rho guanine nucleotide exchange factor 8-like [Jatropha curcas]
14 Hb_007221_020 0.0832327533 - - FAD-binding domain-containing family protein [Populus trichocarpa]
15 Hb_007120_120 0.0844072754 - - protein binding protein, putative [Ricinus communis]
16 Hb_132840_190 0.0904032768 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
17 Hb_007218_050 0.0909079111 - - zinc finger protein, putative [Ricinus communis]
18 Hb_006614_020 0.0937517035 - - PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Jatropha curcas]
19 Hb_004453_160 0.0957135767 - - conserved hypothetical protein [Ricinus communis]
20 Hb_180535_010 0.1002620303 - - -

Gene co-expression network

sample Hb_009847_010 Hb_009847_010 Hb_000556_060 Hb_000556_060 Hb_009847_010--Hb_000556_060 Hb_000847_090 Hb_000847_090 Hb_009847_010--Hb_000847_090 Hb_024071_030 Hb_024071_030 Hb_009847_010--Hb_024071_030 Hb_007044_240 Hb_007044_240 Hb_009847_010--Hb_007044_240 Hb_000127_240 Hb_000127_240 Hb_009847_010--Hb_000127_240 Hb_000375_220 Hb_000375_220 Hb_009847_010--Hb_000375_220 Hb_000556_060--Hb_000847_090 Hb_000556_060--Hb_024071_030 Hb_000556_060--Hb_007044_240 Hb_009663_020 Hb_009663_020 Hb_000556_060--Hb_009663_020 Hb_007120_120 Hb_007120_120 Hb_000556_060--Hb_007120_120 Hb_000847_090--Hb_000375_220 Hb_000847_090--Hb_007044_240 Hb_002307_140 Hb_002307_140 Hb_000847_090--Hb_002307_140 Hb_006711_030 Hb_006711_030 Hb_000847_090--Hb_006711_030 Hb_024071_030--Hb_009663_020 Hb_024071_030--Hb_007120_120 Hb_163566_010 Hb_163566_010 Hb_024071_030--Hb_163566_010 Hb_000321_110 Hb_000321_110 Hb_024071_030--Hb_000321_110 Hb_007044_240--Hb_002307_140 Hb_007218_050 Hb_007218_050 Hb_007044_240--Hb_007218_050 Hb_007044_240--Hb_006711_030 Hb_180535_010 Hb_180535_010 Hb_007044_240--Hb_180535_010 Hb_002030_010 Hb_002030_010 Hb_000127_240--Hb_002030_010 Hb_007760_060 Hb_007760_060 Hb_000127_240--Hb_007760_060 Hb_006614_020 Hb_006614_020 Hb_000127_240--Hb_006614_020 Hb_000127_240--Hb_000375_220 Hb_007576_090 Hb_007576_090 Hb_000127_240--Hb_007576_090 Hb_000127_240--Hb_180535_010 Hb_000375_220--Hb_002030_010 Hb_000375_220--Hb_006614_020 Hb_003006_070 Hb_003006_070 Hb_000375_220--Hb_003006_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.828514 0.698344 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.334347

CAGE analysis