Hb_009862_020

Information

Type -
Description -
Location Contig9862: 22219-22572
Sequence    

Annotation

kegg
ID vvi:100243974
description uncharacterized LOC100243974
nr
ID XP_012092998.1
description PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J8R6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05881 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009862_020 0.0 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
2 Hb_000028_430 0.1281303581 - - PREDICTED: uncharacterized protein LOC105641369 isoform X1 [Jatropha curcas]
3 Hb_000923_100 0.1292324939 - - chloride channel clc, putative [Ricinus communis]
4 Hb_005162_140 0.1346935634 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
5 Hb_003849_190 0.1354560425 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
6 Hb_005305_120 0.1389667934 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
7 Hb_008248_020 0.1390552341 transcription factor TF Family: DBB zinc finger protein, putative [Ricinus communis]
8 Hb_023344_110 0.1404274453 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]
9 Hb_000753_120 0.1445928237 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
10 Hb_031089_050 0.1456637206 - - kinase, putative [Ricinus communis]
11 Hb_001250_080 0.1462289035 - - PREDICTED: F-box/kelch-repeat protein At1g23390 [Jatropha curcas]
12 Hb_001474_050 0.1475821981 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
13 Hb_000800_010 0.148452417 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
14 Hb_002835_280 0.148520663 - - PREDICTED: L-type lectin-domain containing receptor kinase S.1 [Jatropha curcas]
15 Hb_003216_130 0.1533105586 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
16 Hb_000735_140 0.1537008997 - - 3-glucanase family protein [Populus trichocarpa]
17 Hb_000230_470 0.1604873506 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
18 Hb_002046_060 0.1615157496 - - PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
19 Hb_000109_190 0.162158517 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
20 Hb_000032_510 0.1625003511 - - PREDICTED: SUN domain-containing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_009862_020 Hb_009862_020 Hb_000028_430 Hb_000028_430 Hb_009862_020--Hb_000028_430 Hb_000923_100 Hb_000923_100 Hb_009862_020--Hb_000923_100 Hb_005162_140 Hb_005162_140 Hb_009862_020--Hb_005162_140 Hb_003849_190 Hb_003849_190 Hb_009862_020--Hb_003849_190 Hb_005305_120 Hb_005305_120 Hb_009862_020--Hb_005305_120 Hb_008248_020 Hb_008248_020 Hb_009862_020--Hb_008248_020 Hb_005054_020 Hb_005054_020 Hb_000028_430--Hb_005054_020 Hb_001250_080 Hb_001250_080 Hb_000028_430--Hb_001250_080 Hb_000227_280 Hb_000227_280 Hb_000028_430--Hb_000227_280 Hb_000928_120 Hb_000928_120 Hb_000028_430--Hb_000928_120 Hb_003001_130 Hb_003001_130 Hb_000028_430--Hb_003001_130 Hb_000028_430--Hb_003849_190 Hb_000077_160 Hb_000077_160 Hb_000923_100--Hb_000077_160 Hb_002835_280 Hb_002835_280 Hb_000923_100--Hb_002835_280 Hb_000336_180 Hb_000336_180 Hb_000923_100--Hb_000336_180 Hb_000203_200 Hb_000203_200 Hb_000923_100--Hb_000203_200 Hb_121089_020 Hb_121089_020 Hb_000923_100--Hb_121089_020 Hb_001474_050 Hb_001474_050 Hb_005162_140--Hb_001474_050 Hb_012762_040 Hb_012762_040 Hb_005162_140--Hb_012762_040 Hb_005162_140--Hb_001250_080 Hb_002343_010 Hb_002343_010 Hb_005162_140--Hb_002343_010 Hb_003687_130 Hb_003687_130 Hb_005162_140--Hb_003687_130 Hb_003849_190--Hb_008248_020 Hb_023344_110 Hb_023344_110 Hb_003849_190--Hb_023344_110 Hb_000735_140 Hb_000735_140 Hb_003849_190--Hb_000735_140 Hb_002875_070 Hb_002875_070 Hb_003849_190--Hb_002875_070 Hb_002450_030 Hb_002450_030 Hb_003849_190--Hb_002450_030 Hb_000056_080 Hb_000056_080 Hb_003849_190--Hb_000056_080 Hb_005305_120--Hb_002835_280 Hb_000861_100 Hb_000861_100 Hb_005305_120--Hb_000861_100 Hb_001124_140 Hb_001124_140 Hb_005305_120--Hb_001124_140 Hb_002759_100 Hb_002759_100 Hb_005305_120--Hb_002759_100 Hb_009449_100 Hb_009449_100 Hb_005305_120--Hb_009449_100 Hb_005731_100 Hb_005731_100 Hb_005305_120--Hb_005731_100 Hb_008248_020--Hb_023344_110 Hb_005714_100 Hb_005714_100 Hb_008248_020--Hb_005714_100 Hb_000035_050 Hb_000035_050 Hb_008248_020--Hb_000035_050 Hb_001133_010 Hb_001133_010 Hb_008248_020--Hb_001133_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.4749 86.9646 49.0244 93.9151 5.30133 0.727825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.6033 17.8431 14.142 21.9672 71.9731

CAGE analysis