Hb_009879_010

Information

Type -
Description -
Location Contig9879: 4300-5910
Sequence    

Annotation

kegg
ID rcu:RCOM_1214240
description inorganic phosphate transporter, putative
nr
ID ADL27918.1
description phosphate transporter 1 [Hevea brasiliensis]
swissprot
ID Q494P0
description Probable inorganic phosphate transporter 1-7 OS=Arabidopsis thaliana GN=PHT1-7 PE=2 SV=2
trembl
ID F1ASZ4
description Phosphate transporter 1 OS=Hevea brasiliensis GN=Pht1 PE=2 SV=1
Gene Ontology
ID GO:0016021
description phosphate transporter

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64685: 4496-4926 , PASA_asmbl_64686: 5861-7284
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009879_010 0.0 - - phosphate transporter 1 [Hevea brasiliensis]
2 Hb_000920_240 0.1295637387 - - PREDICTED: uncharacterized protein At5g39865 [Jatropha curcas]
3 Hb_000001_050 0.1299355809 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
4 Hb_029866_040 0.1384731669 - - PREDICTED: plastid division protein PDV1 [Jatropha curcas]
5 Hb_000124_020 0.1436184513 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
6 Hb_000179_050 0.1441860442 - - 40S ribosomal protein S17A [Hevea brasiliensis]
7 Hb_073973_140 0.1483346475 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
8 Hb_011381_100 0.1545696526 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
9 Hb_001123_230 0.1556298449 - - PREDICTED: uncharacterized protein LOC105647321 [Jatropha curcas]
10 Hb_000030_150 0.1557045882 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
11 Hb_006153_120 0.1570053588 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
12 Hb_003787_020 0.1592320477 - - PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Jatropha curcas]
13 Hb_005431_010 0.1601638154 - - PREDICTED: glycine cleavage system H protein 2, mitochondrial [Jatropha curcas]
14 Hb_002119_060 0.1617863973 transcription factor TF Family: Orphans histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
15 Hb_071736_020 0.162603432 - - hypothetical protein POPTR_0006s10330g [Populus trichocarpa]
16 Hb_000840_210 0.1631943788 - - actin actin-like protein [Coniophora puteana RWD-64-598 SS2]
17 Hb_002875_080 0.1634419112 - - protein with unknown function [Ricinus communis]
18 Hb_004705_100 0.1674810561 - - PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Jatropha curcas]
19 Hb_000260_120 0.1686125799 - - DNA binding protein, putative [Ricinus communis]
20 Hb_000297_200 0.1687735216 - - PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vinifera]

Gene co-expression network

sample Hb_009879_010 Hb_009879_010 Hb_000920_240 Hb_000920_240 Hb_009879_010--Hb_000920_240 Hb_000001_050 Hb_000001_050 Hb_009879_010--Hb_000001_050 Hb_029866_040 Hb_029866_040 Hb_009879_010--Hb_029866_040 Hb_000124_020 Hb_000124_020 Hb_009879_010--Hb_000124_020 Hb_000179_050 Hb_000179_050 Hb_009879_010--Hb_000179_050 Hb_073973_140 Hb_073973_140 Hb_009879_010--Hb_073973_140 Hb_000030_150 Hb_000030_150 Hb_000920_240--Hb_000030_150 Hb_003787_020 Hb_003787_020 Hb_000920_240--Hb_003787_020 Hb_000997_400 Hb_000997_400 Hb_000920_240--Hb_000997_400 Hb_000920_240--Hb_029866_040 Hb_000297_200 Hb_000297_200 Hb_000920_240--Hb_000297_200 Hb_000920_240--Hb_000001_050 Hb_000001_050--Hb_029866_040 Hb_000046_110 Hb_000046_110 Hb_000001_050--Hb_000046_110 Hb_071736_020 Hb_071736_020 Hb_000001_050--Hb_071736_020 Hb_008311_010 Hb_008311_010 Hb_000001_050--Hb_008311_010 Hb_001677_110 Hb_001677_110 Hb_000001_050--Hb_001677_110 Hb_000260_120 Hb_000260_120 Hb_000001_050--Hb_000260_120 Hb_000377_060 Hb_000377_060 Hb_029866_040--Hb_000377_060 Hb_005431_010 Hb_005431_010 Hb_029866_040--Hb_005431_010 Hb_011381_100 Hb_011381_100 Hb_029866_040--Hb_011381_100 Hb_001109_020 Hb_001109_020 Hb_029866_040--Hb_001109_020 Hb_000009_160 Hb_000009_160 Hb_029866_040--Hb_000009_160 Hb_000622_310 Hb_000622_310 Hb_000124_020--Hb_000622_310 Hb_000056_100 Hb_000056_100 Hb_000124_020--Hb_000056_100 Hb_010863_080 Hb_010863_080 Hb_000124_020--Hb_010863_080 Hb_000179_210 Hb_000179_210 Hb_000124_020--Hb_000179_210 Hb_000116_470 Hb_000116_470 Hb_000124_020--Hb_000116_470 Hb_005147_090 Hb_005147_090 Hb_000124_020--Hb_005147_090 Hb_006153_120 Hb_006153_120 Hb_000179_050--Hb_006153_120 Hb_001856_020 Hb_001856_020 Hb_000179_050--Hb_001856_020 Hb_007161_010 Hb_007161_010 Hb_000179_050--Hb_007161_010 Hb_000196_090 Hb_000196_090 Hb_000179_050--Hb_000196_090 Hb_002849_210 Hb_002849_210 Hb_000179_050--Hb_002849_210 Hb_000179_050--Hb_005147_090 Hb_003376_360 Hb_003376_360 Hb_073973_140--Hb_003376_360 Hb_000005_330 Hb_000005_330 Hb_073973_140--Hb_000005_330 Hb_001143_170 Hb_001143_170 Hb_073973_140--Hb_001143_170 Hb_002119_060 Hb_002119_060 Hb_073973_140--Hb_002119_060 Hb_000049_120 Hb_000049_120 Hb_073973_140--Hb_000049_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.065 12.6339 1.13005 29.9715 22.7388 24.8371
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
36.0005 39.8251 63.4617 11.1235 0.855023

CAGE analysis