Hb_009898_050

Information

Type -
Description -
Location Contig9898: 34521-46103
Sequence    

Annotation

kegg
ID rcu:RCOM_0714650
description taxilin, putative
nr
ID XP_012086510.1
description PREDICTED: beta-taxilin [Jatropha curcas]
swissprot
ID Q6PAM1
description Alpha-taxilin OS=Mus musculus GN=Txlna PE=2 SV=1
trembl
ID A0A067JSH0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23954 PE=4 SV=1
Gene Ontology
ID GO:0019905
description beta-taxilin-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64710: 34478-45924
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009898_050 0.0 - - PREDICTED: beta-taxilin [Jatropha curcas]
2 Hb_006153_070 0.0422927322 - - 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Jatropha curcas]
3 Hb_000110_310 0.0581590155 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase, putative [Ricinus communis]
4 Hb_008616_050 0.0599769796 - - PREDICTED: putative deoxyribonuclease TATDN1 [Jatropha curcas]
5 Hb_000915_260 0.0615528475 - - PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]
6 Hb_000640_170 0.0622545576 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
7 Hb_000579_120 0.0648690237 - - PREDICTED: uncharacterized protein LOC105633845 [Jatropha curcas]
8 Hb_000035_470 0.0661621003 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
9 Hb_168978_030 0.0669798548 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
10 Hb_004846_220 0.0695053741 - - PREDICTED: probable protein phosphatase 2C 11 isoform X1 [Jatropha curcas]
11 Hb_001268_240 0.0700398692 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
12 Hb_026198_070 0.0701199418 - - PREDICTED: uncharacterized membrane protein At4g09580 [Jatropha curcas]
13 Hb_000381_120 0.0737876891 - - PREDICTED: uncharacterized protein LOC105648175 [Jatropha curcas]
14 Hb_001021_150 0.0758727747 - - PREDICTED: metal tolerance protein C1 [Jatropha curcas]
15 Hb_041290_020 0.0765057236 - - PREDICTED: centromere/kinetochore protein zw10 homolog isoform X2 [Jatropha curcas]
16 Hb_001232_190 0.0767790779 - - PREDICTED: uncharacterized protein LOC105639761 isoform X2 [Jatropha curcas]
17 Hb_001357_350 0.077450826 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001318_280 0.0777422718 - - Protein FAM18B, putative [Ricinus communis]
19 Hb_001366_370 0.0782340482 - - PREDICTED: aarF domain-containing protein kinase 4 isoform X1 [Jatropha curcas]
20 Hb_000138_100 0.0784376182 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_009898_050 Hb_009898_050 Hb_006153_070 Hb_006153_070 Hb_009898_050--Hb_006153_070 Hb_000110_310 Hb_000110_310 Hb_009898_050--Hb_000110_310 Hb_008616_050 Hb_008616_050 Hb_009898_050--Hb_008616_050 Hb_000915_260 Hb_000915_260 Hb_009898_050--Hb_000915_260 Hb_000640_170 Hb_000640_170 Hb_009898_050--Hb_000640_170 Hb_000579_120 Hb_000579_120 Hb_009898_050--Hb_000579_120 Hb_006153_070--Hb_000110_310 Hb_007831_010 Hb_007831_010 Hb_006153_070--Hb_007831_010 Hb_168978_030 Hb_168978_030 Hb_006153_070--Hb_168978_030 Hb_006153_070--Hb_000640_170 Hb_006153_070--Hb_000579_120 Hb_000110_310--Hb_000579_120 Hb_000270_680 Hb_000270_680 Hb_000110_310--Hb_000270_680 Hb_001472_100 Hb_001472_100 Hb_000110_310--Hb_001472_100 Hb_001268_240 Hb_001268_240 Hb_000110_310--Hb_001268_240 Hb_001232_190 Hb_001232_190 Hb_008616_050--Hb_001232_190 Hb_002641_060 Hb_002641_060 Hb_008616_050--Hb_002641_060 Hb_004545_110 Hb_004545_110 Hb_008616_050--Hb_004545_110 Hb_001318_280 Hb_001318_280 Hb_008616_050--Hb_001318_280 Hb_008847_030 Hb_008847_030 Hb_008616_050--Hb_008847_030 Hb_002276_170 Hb_002276_170 Hb_000915_260--Hb_002276_170 Hb_001141_020 Hb_001141_020 Hb_000915_260--Hb_001141_020 Hb_000915_260--Hb_168978_030 Hb_000915_260--Hb_006153_070 Hb_001205_120 Hb_001205_120 Hb_000915_260--Hb_001205_120 Hb_000640_170--Hb_168978_030 Hb_000035_470 Hb_000035_470 Hb_000640_170--Hb_000035_470 Hb_001599_040 Hb_001599_040 Hb_000640_170--Hb_001599_040 Hb_000156_010 Hb_000156_010 Hb_000640_170--Hb_000156_010 Hb_026198_070 Hb_026198_070 Hb_000640_170--Hb_026198_070 Hb_000058_130 Hb_000058_130 Hb_000579_120--Hb_000058_130 Hb_000579_120--Hb_001232_190 Hb_000976_120 Hb_000976_120 Hb_000579_120--Hb_000976_120 Hb_000207_150 Hb_000207_150 Hb_000579_120--Hb_000207_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.05 6.20087 15.9391 17.1876 13.4693 14.4192
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.4713 13.6177 12.2913 15.0129 15.5322

CAGE analysis