Hb_009904_010

Information

Type -
Description -
Location Contig9904: 1814-2325
Sequence    

Annotation

kegg
ID tcc:TCM_005826
description Cc-nbs-lrr resistance protein, putative isoform 1
nr
ID KDP43598.1
description hypothetical protein JCGZ_16885 [Jatropha curcas]
swissprot
ID Q9LRR5
description Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1
trembl
ID A0A067L8M3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16885 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009904_010 0.0 - - hypothetical protein JCGZ_16885 [Jatropha curcas]
2 Hb_000309_130 0.1137964226 - - hypothetical protein JCGZ_09592 [Jatropha curcas]
3 Hb_007810_010 0.1147652132 - - PREDICTED: uncharacterized protein LOC105647655 isoform X1 [Jatropha curcas]
4 Hb_003124_150 0.1164487522 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like [Jatropha curcas]
5 Hb_002043_030 0.1209969301 - - hypothetical protein RCOM_1486170 [Ricinus communis]
6 Hb_000367_160 0.12361517 - - PREDICTED: SNAP25 homologous protein SNAP33 [Populus euphratica]
7 Hb_001287_040 0.1245615541 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
8 Hb_004162_130 0.1279900361 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007304_120 0.1318231079 - - NAD(P)-binding Rossmann-fold superfamily protein isoform 1 [Theobroma cacao]
10 Hb_000448_050 0.1325880294 - - PREDICTED: ubiquinol oxidase, mitochondrial [Jatropha curcas]
11 Hb_000805_110 0.1326352057 - - PREDICTED: uncharacterized protein C24B11.05 [Jatropha curcas]
12 Hb_001019_100 0.1327973187 - - BnaC02g13240D [Brassica napus]
13 Hb_003728_060 0.1337760647 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Jatropha curcas]
14 Hb_003657_010 0.1344980638 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002217_020 0.13516838 - - PREDICTED: uncharacterized protein LOC105643601 isoform X1 [Jatropha curcas]
16 Hb_004157_020 0.1354472983 - - PREDICTED: histone H2B-like [Gossypium raimondii]
17 Hb_012114_070 0.1365683842 - - PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
18 Hb_007425_010 0.1388658253 - - uncharacterized protein LOC100499741 [Glycine max]
19 Hb_006740_030 0.1389400936 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]
20 Hb_019280_050 0.1393652569 - - PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 [Jatropha curcas]

Gene co-expression network

sample Hb_009904_010 Hb_009904_010 Hb_000309_130 Hb_000309_130 Hb_009904_010--Hb_000309_130 Hb_007810_010 Hb_007810_010 Hb_009904_010--Hb_007810_010 Hb_003124_150 Hb_003124_150 Hb_009904_010--Hb_003124_150 Hb_002043_030 Hb_002043_030 Hb_009904_010--Hb_002043_030 Hb_000367_160 Hb_000367_160 Hb_009904_010--Hb_000367_160 Hb_001287_040 Hb_001287_040 Hb_009904_010--Hb_001287_040 Hb_000733_180 Hb_000733_180 Hb_000309_130--Hb_000733_180 Hb_000309_130--Hb_003124_150 Hb_000928_070 Hb_000928_070 Hb_000309_130--Hb_000928_070 Hb_022250_060 Hb_022250_060 Hb_000309_130--Hb_022250_060 Hb_001019_100 Hb_001019_100 Hb_000309_130--Hb_001019_100 Hb_000221_190 Hb_000221_190 Hb_000309_130--Hb_000221_190 Hb_007810_010--Hb_002043_030 Hb_004218_020 Hb_004218_020 Hb_007810_010--Hb_004218_020 Hb_000008_440 Hb_000008_440 Hb_007810_010--Hb_000008_440 Hb_003657_010 Hb_003657_010 Hb_007810_010--Hb_003657_010 Hb_000120_640 Hb_000120_640 Hb_007810_010--Hb_000120_640 Hb_001541_070 Hb_001541_070 Hb_007810_010--Hb_001541_070 Hb_000310_020 Hb_000310_020 Hb_003124_150--Hb_000310_020 Hb_003124_150--Hb_000928_070 Hb_000505_130 Hb_000505_130 Hb_003124_150--Hb_000505_130 Hb_000729_030 Hb_000729_030 Hb_003124_150--Hb_000729_030 Hb_000336_150 Hb_000336_150 Hb_003124_150--Hb_000336_150 Hb_000580_020 Hb_000580_020 Hb_003124_150--Hb_000580_020 Hb_002311_360 Hb_002311_360 Hb_002043_030--Hb_002311_360 Hb_092462_020 Hb_092462_020 Hb_002043_030--Hb_092462_020 Hb_002043_030--Hb_000309_130 Hb_003038_240 Hb_003038_240 Hb_002043_030--Hb_003038_240 Hb_002704_070 Hb_002704_070 Hb_002043_030--Hb_002704_070 Hb_012286_030 Hb_012286_030 Hb_000367_160--Hb_012286_030 Hb_000155_200 Hb_000155_200 Hb_000367_160--Hb_000155_200 Hb_019280_050 Hb_019280_050 Hb_000367_160--Hb_019280_050 Hb_004410_080 Hb_004410_080 Hb_000367_160--Hb_004410_080 Hb_000193_110 Hb_000193_110 Hb_000367_160--Hb_000193_110 Hb_000367_160--Hb_000336_150 Hb_007002_020 Hb_007002_020 Hb_001287_040--Hb_007002_020 Hb_006132_090 Hb_006132_090 Hb_001287_040--Hb_006132_090 Hb_001587_180 Hb_001587_180 Hb_001287_040--Hb_001587_180 Hb_001287_040--Hb_003124_150 Hb_000811_070 Hb_000811_070 Hb_001287_040--Hb_000811_070 Hb_001900_140 Hb_001900_140 Hb_001287_040--Hb_001900_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.230766 0.637661 1.00611 0.432669 0.422198 0.402639
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.837239 0.822074 1.04409 0.212442 0.572885

CAGE analysis