Hb_010128_110

Information

Type -
Description -
Location Contig10128: 74229-75512
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa025034mg
description hypothetical protein
nr
ID XP_012069741.1
description PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID W9QXK4
description Uncharacterized protein OS=Morus notabilis GN=L484_022651 PE=4 SV=1
Gene Ontology
ID GO:0000394
description PREDICTED: uncharacterized protein LOC105632071

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00655: 74201-74432 , PASA_asmbl_00656: 75381-76017
cDNA
(Sanger)
(ID:Location)		 017_D07.ab1: 75419-76017

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010128_110 0.0 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
2 Hb_002843_190 0.1767079858 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 7 isoform X1 [Jatropha curcas]
3 Hb_001631_080 0.1800038497 - - PREDICTED: importin-5-like [Populus euphratica]
4 Hb_000175_040 0.1927597007 - - hypothetical protein JCGZ_06119 [Jatropha curcas]
5 Hb_001141_400 0.1937112194 - - hypothetical protein B456_007G2854002, partial [Gossypium raimondii]
6 Hb_028365_010 0.202833951 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
7 Hb_003756_010 0.2058897301 - - PREDICTED: uncharacterized protein LOC105642108 [Jatropha curcas]
8 Hb_000445_330 0.2087630188 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000373_290 0.211363707 - - RecName: Full=Citrate-binding protein; Flags: Precursor [Hevea brasiliensis]
10 Hb_001109_120 0.2142260291 - - PREDICTED: acyl-CoA-binding protein-like [Nelumbo nucifera]
11 Hb_005450_010 0.2166067146 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
12 Hb_005410_030 0.2171958241 - - glutaredoxin 2 [Hevea brasiliensis]
13 Hb_003057_130 0.2209691288 - - -
14 Hb_000788_120 0.2236113567 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPS2-like [Eucalyptus grandis]
15 Hb_004060_010 0.2276163248 - - -
16 Hb_000086_330 0.2292751643 - - PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Jatropha curcas]
17 Hb_001741_050 0.2335909085 - - -
18 Hb_012395_100 0.234212423 - - eukaryotic translation initiation factor 4e, putative [Ricinus communis]
19 Hb_003745_010 0.2351344142 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
20 Hb_019516_040 0.2358700239 desease resistance Gene Name: AAA Katanin p60 ATPase-containing subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_010128_110 Hb_010128_110 Hb_002843_190 Hb_002843_190 Hb_010128_110--Hb_002843_190 Hb_001631_080 Hb_001631_080 Hb_010128_110--Hb_001631_080 Hb_000175_040 Hb_000175_040 Hb_010128_110--Hb_000175_040 Hb_001141_400 Hb_001141_400 Hb_010128_110--Hb_001141_400 Hb_028365_010 Hb_028365_010 Hb_010128_110--Hb_028365_010 Hb_003756_010 Hb_003756_010 Hb_010128_110--Hb_003756_010 Hb_002843_190--Hb_028365_010 Hb_027751_040 Hb_027751_040 Hb_002843_190--Hb_027751_040 Hb_027751_030 Hb_027751_030 Hb_002843_190--Hb_027751_030 Hb_003992_120 Hb_003992_120 Hb_002843_190--Hb_003992_120 Hb_001980_020 Hb_001980_020 Hb_002843_190--Hb_001980_020 Hb_048141_010 Hb_048141_010 Hb_001631_080--Hb_048141_010 Hb_003540_230 Hb_003540_230 Hb_001631_080--Hb_003540_230 Hb_005450_010 Hb_005450_010 Hb_001631_080--Hb_005450_010 Hb_010578_090 Hb_010578_090 Hb_001631_080--Hb_010578_090 Hb_124315_040 Hb_124315_040 Hb_001631_080--Hb_124315_040 Hb_001631_070 Hb_001631_070 Hb_001631_080--Hb_001631_070 Hb_003057_130 Hb_003057_130 Hb_000175_040--Hb_003057_130 Hb_025246_010 Hb_025246_010 Hb_000175_040--Hb_025246_010 Hb_000699_110 Hb_000699_110 Hb_000175_040--Hb_000699_110 Hb_000788_120 Hb_000788_120 Hb_000175_040--Hb_000788_120 Hb_007625_020 Hb_007625_020 Hb_000175_040--Hb_007625_020 Hb_004502_080 Hb_004502_080 Hb_000175_040--Hb_004502_080 Hb_000373_300 Hb_000373_300 Hb_001141_400--Hb_000373_300 Hb_002742_010 Hb_002742_010 Hb_001141_400--Hb_002742_010 Hb_001141_400--Hb_028365_010 Hb_188382_010 Hb_188382_010 Hb_001141_400--Hb_188382_010 Hb_159085_010 Hb_159085_010 Hb_001141_400--Hb_159085_010 Hb_003023_050 Hb_003023_050 Hb_028365_010--Hb_003023_050 Hb_012779_110 Hb_012779_110 Hb_028365_010--Hb_012779_110 Hb_005410_030 Hb_005410_030 Hb_028365_010--Hb_005410_030 Hb_001109_120 Hb_001109_120 Hb_028365_010--Hb_001109_120 Hb_002221_080 Hb_002221_080 Hb_028365_010--Hb_002221_080 Hb_010872_060 Hb_010872_060 Hb_003756_010--Hb_010872_060 Hb_175445_010 Hb_175445_010 Hb_003756_010--Hb_175445_010 Hb_012799_060 Hb_012799_060 Hb_003756_010--Hb_012799_060 Hb_001140_160 Hb_001140_160 Hb_003756_010--Hb_001140_160 Hb_000078_030 Hb_000078_030 Hb_003756_010--Hb_000078_030 Hb_000699_020 Hb_000699_020 Hb_003756_010--Hb_000699_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
92.4055 1.72112 0.899353 2.81526 16.1941 48.1388
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
120.745 51.1506 2.74006 0.458319 0.7563

CAGE analysis