Hb_010129_020

Information

Type -
Description -
Location Contig10129: 32875-35812
Sequence    

Annotation

kegg
ID rcu:RCOM_0813450
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID XP_002518764.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9LJK2
description Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2
trembl
ID B9RYI0
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0813450 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010129_020 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_188163_010 0.0896281272 - - hypothetical protein CISIN_1g048732mg [Citrus sinensis]
3 Hb_004129_180 0.1140052309 - - hypothetical protein JCGZ_11090 [Jatropha curcas]
4 Hb_097933_010 0.1291380401 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
5 Hb_000906_120 0.1438209643 - - hypothetical protein VITISV_006406 [Vitis vinifera]
6 Hb_001880_020 0.1576398502 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
7 Hb_002188_050 0.1590881832 - - PREDICTED: serine carboxypeptidase-like 2 [Jatropha curcas]
8 Hb_030885_010 0.1652967096 - - -
9 Hb_125116_020 0.167167247 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X5 [Populus euphratica]
10 Hb_004052_060 0.1675931386 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
11 Hb_003376_280 0.1694458702 - - ATP binding protein, putative [Ricinus communis]
12 Hb_006415_010 0.1706513663 - - -
13 Hb_004487_060 0.1707415558 - - cytochrome P450, putative [Ricinus communis]
14 Hb_089299_010 0.1720741519 - - conserved hypothetical protein [Ricinus communis]
15 Hb_186634_010 0.1726821411 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
16 Hb_118909_010 0.1727019119 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
17 Hb_001234_090 0.1728026177 - - hypothetical protein CISIN_1g013527mg [Citrus sinensis]
18 Hb_029695_040 0.1728389874 - - Pectate lyase precursor, putative [Ricinus communis]
19 Hb_003940_060 0.1729880781 - - PREDICTED: uncharacterized protein LOC105784680 [Gossypium raimondii]
20 Hb_108160_010 0.1730733558 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_010129_020 Hb_010129_020 Hb_188163_010 Hb_188163_010 Hb_010129_020--Hb_188163_010 Hb_004129_180 Hb_004129_180 Hb_010129_020--Hb_004129_180 Hb_097933_010 Hb_097933_010 Hb_010129_020--Hb_097933_010 Hb_000906_120 Hb_000906_120 Hb_010129_020--Hb_000906_120 Hb_001880_020 Hb_001880_020 Hb_010129_020--Hb_001880_020 Hb_002188_050 Hb_002188_050 Hb_010129_020--Hb_002188_050 Hb_188163_010--Hb_004129_180 Hb_188163_010--Hb_097933_010 Hb_188163_010--Hb_000906_120 Hb_188163_010--Hb_002188_050 Hb_006415_010 Hb_006415_010 Hb_188163_010--Hb_006415_010 Hb_067634_010 Hb_067634_010 Hb_004129_180--Hb_067634_010 Hb_000312_030 Hb_000312_030 Hb_004129_180--Hb_000312_030 Hb_115868_030 Hb_115868_030 Hb_004129_180--Hb_115868_030 Hb_153924_010 Hb_153924_010 Hb_004129_180--Hb_153924_010 Hb_000575_050 Hb_000575_050 Hb_097933_010--Hb_000575_050 Hb_021888_160 Hb_021888_160 Hb_097933_010--Hb_021888_160 Hb_006907_110 Hb_006907_110 Hb_097933_010--Hb_006907_110 Hb_000501_080 Hb_000501_080 Hb_097933_010--Hb_000501_080 Hb_174662_020 Hb_174662_020 Hb_097933_010--Hb_174662_020 Hb_000906_120--Hb_006415_010 Hb_000906_120--Hb_002188_050 Hb_089299_010 Hb_089299_010 Hb_000906_120--Hb_089299_010 Hb_005021_040 Hb_005021_040 Hb_000906_120--Hb_005021_040 Hb_142051_010 Hb_142051_010 Hb_000906_120--Hb_142051_010 Hb_000167_070 Hb_000167_070 Hb_001880_020--Hb_000167_070 Hb_005595_030 Hb_005595_030 Hb_001880_020--Hb_005595_030 Hb_003927_020 Hb_003927_020 Hb_001880_020--Hb_003927_020 Hb_001856_280 Hb_001856_280 Hb_001880_020--Hb_001856_280 Hb_043792_030 Hb_043792_030 Hb_001880_020--Hb_043792_030 Hb_001355_050 Hb_001355_050 Hb_001880_020--Hb_001355_050 Hb_002188_050--Hb_006415_010 Hb_002188_050--Hb_005021_040 Hb_002188_050--Hb_089299_010 Hb_005714_120 Hb_005714_120 Hb_002188_050--Hb_005714_120 Hb_002121_070 Hb_002121_070 Hb_002188_050--Hb_002121_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.11075 0.74766 0.143873 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0230481 0 6.34324 10.1969

CAGE analysis