Hb_010136_020

Information

Type -
Description -
Location Contig10136: 2072-16750
Sequence    

Annotation

kegg
ID tcc:TCM_032275
description Malectin/receptor-like protein kinase family protein
nr
ID KEH40381.1
description stress-induced receptor-like kinase [Medicago truncatula]
swissprot
ID Q8RX80
description Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2
trembl
ID A0A072VFN8
description Stress-induced receptor-like kinase OS=Medicago truncatula GN=MTR_1g028100 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010136_020 0.0 - - stress-induced receptor-like kinase [Medicago truncatula]
2 Hb_002006_110 0.0031245068 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
3 Hb_036754_040 0.0219473536 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_001677_140 0.0415939909 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
5 Hb_019978_010 0.0559622264 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
6 Hb_184752_010 0.0632013609 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
7 Hb_034581_010 0.0646915677 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
8 Hb_004724_290 0.0662618678 transcription factor TF Family: NAC -
9 Hb_110356_010 0.0733835486 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
10 Hb_001511_200 0.077847967 - - Embryonic abundant protein, putative [Ricinus communis]
11 Hb_128851_020 0.0785501418 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_006916_220 0.0824600329 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
13 Hb_002548_030 0.0882399822 - - PREDICTED: uncharacterized protein LOC103343650 [Prunus mume]
14 Hb_157957_010 0.0889437741 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
15 Hb_000359_230 0.0898068314 - - PREDICTED: putative DNA-binding protein ESCAROLA [Prunus mume]
16 Hb_064692_010 0.1043817215 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_099188_010 0.1052422507 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
18 Hb_004724_310 0.1063746632 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
19 Hb_187620_010 0.1110116176 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
20 Hb_013591_010 0.1110452137 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]

Gene co-expression network

sample Hb_010136_020 Hb_010136_020 Hb_002006_110 Hb_002006_110 Hb_010136_020--Hb_002006_110 Hb_036754_040 Hb_036754_040 Hb_010136_020--Hb_036754_040 Hb_001677_140 Hb_001677_140 Hb_010136_020--Hb_001677_140 Hb_019978_010 Hb_019978_010 Hb_010136_020--Hb_019978_010 Hb_184752_010 Hb_184752_010 Hb_010136_020--Hb_184752_010 Hb_034581_010 Hb_034581_010 Hb_010136_020--Hb_034581_010 Hb_002006_110--Hb_036754_040 Hb_002006_110--Hb_001677_140 Hb_002006_110--Hb_019978_010 Hb_002006_110--Hb_184752_010 Hb_004724_290 Hb_004724_290 Hb_002006_110--Hb_004724_290 Hb_036754_040--Hb_001677_140 Hb_036754_040--Hb_034581_010 Hb_036754_040--Hb_019978_010 Hb_110356_010 Hb_110356_010 Hb_036754_040--Hb_110356_010 Hb_128851_020 Hb_128851_020 Hb_001677_140--Hb_128851_020 Hb_001677_140--Hb_110356_010 Hb_001677_140--Hb_034581_010 Hb_019978_010--Hb_004724_290 Hb_019978_010--Hb_184752_010 Hb_006916_220 Hb_006916_220 Hb_019978_010--Hb_006916_220 Hb_184752_010--Hb_004724_290 Hb_184752_010--Hb_036754_040 Hb_184752_010--Hb_001677_140 Hb_034581_010--Hb_110356_010 Hb_002548_030 Hb_002548_030 Hb_034581_010--Hb_002548_030 Hb_000359_230 Hb_000359_230 Hb_034581_010--Hb_000359_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.32408 0.527514 0.545333 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis