Hb_010162_010

Information

Type -
Description -
Location Contig10162: 1183-8404
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_012073438.1
description PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUC3
description JHL06P13.14 protein OS=Jatropha curcas GN=JHL06P13.14 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010162_010 0.0 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
2 Hb_002374_060 0.1030926902 - - amino acid transporter, putative [Ricinus communis]
3 Hb_156696_010 0.1115022606 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
4 Hb_002461_070 0.1260081768 - - gibberellin 2-oxidase, putative [Ricinus communis]
5 Hb_003371_040 0.135748096 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
6 Hb_006314_020 0.1404142077 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
7 Hb_001006_030 0.1406739131 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000676_170 0.1438618409 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
9 Hb_029866_080 0.1457857215 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
10 Hb_016120_020 0.1547077463 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
11 Hb_001821_030 0.1597760408 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
12 Hb_000070_070 0.1626301667 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
13 Hb_001610_060 0.1634233986 - - hypothetical protein TRIUR3_12067 [Triticum urartu]
14 Hb_002289_110 0.1646919212 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
15 Hb_001998_260 0.1649634717 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000069_520 0.1659793157 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]
17 Hb_001799_090 0.1676307097 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
18 Hb_001856_150 0.1680157989 - - -
19 Hb_000081_030 0.1690298145 - - BnaC09g05810D [Brassica napus]
20 Hb_003967_010 0.1709689916 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_010162_010 Hb_010162_010 Hb_002374_060 Hb_002374_060 Hb_010162_010--Hb_002374_060 Hb_156696_010 Hb_156696_010 Hb_010162_010--Hb_156696_010 Hb_002461_070 Hb_002461_070 Hb_010162_010--Hb_002461_070 Hb_003371_040 Hb_003371_040 Hb_010162_010--Hb_003371_040 Hb_006314_020 Hb_006314_020 Hb_010162_010--Hb_006314_020 Hb_001006_030 Hb_001006_030 Hb_010162_010--Hb_001006_030 Hb_000676_170 Hb_000676_170 Hb_002374_060--Hb_000676_170 Hb_002374_060--Hb_001006_030 Hb_000069_520 Hb_000069_520 Hb_002374_060--Hb_000069_520 Hb_016120_020 Hb_016120_020 Hb_002374_060--Hb_016120_020 Hb_000856_250 Hb_000856_250 Hb_002374_060--Hb_000856_250 Hb_156696_010--Hb_001006_030 Hb_111147_010 Hb_111147_010 Hb_156696_010--Hb_111147_010 Hb_156696_010--Hb_002461_070 Hb_001998_260 Hb_001998_260 Hb_156696_010--Hb_001998_260 Hb_028008_030 Hb_028008_030 Hb_156696_010--Hb_028008_030 Hb_002461_070--Hb_001006_030 Hb_008001_020 Hb_008001_020 Hb_002461_070--Hb_008001_020 Hb_001821_030 Hb_001821_030 Hb_002461_070--Hb_001821_030 Hb_002461_070--Hb_002374_060 Hb_003371_040--Hb_006314_020 Hb_002876_190 Hb_002876_190 Hb_003371_040--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_003371_040--Hb_001775_130 Hb_000429_030 Hb_000429_030 Hb_003371_040--Hb_000429_030 Hb_003171_070 Hb_003171_070 Hb_003371_040--Hb_003171_070 Hb_001856_150 Hb_001856_150 Hb_003371_040--Hb_001856_150 Hb_006314_020--Hb_001856_150 Hb_000230_160 Hb_000230_160 Hb_006314_020--Hb_000230_160 Hb_006314_020--Hb_003171_070 Hb_148817_010 Hb_148817_010 Hb_006314_020--Hb_148817_010 Hb_000081_030 Hb_000081_030 Hb_006314_020--Hb_000081_030 Hb_001006_030--Hb_000069_520 Hb_003967_010 Hb_003967_010 Hb_001006_030--Hb_003967_010 Hb_003266_060 Hb_003266_060 Hb_001006_030--Hb_003266_060 Hb_002289_110 Hb_002289_110 Hb_001006_030--Hb_002289_110 Hb_001006_030--Hb_000676_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.751093 0.167943 2.3053 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0209637 0 0.125338 1.63308 0.174632

CAGE analysis