Hb_010164_030

Information

Type -
Description -
Location Contig10164: 7175-10503
Sequence    

Annotation

kegg
ID rcu:RCOM_0812540
description hypothetical protein
nr
ID XP_012087493.1
description PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
swissprot
ID Q9C5D0
description CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1
trembl
ID A0A067JZM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23987 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010164_030 0.0 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
2 Hb_147006_010 0.0506433139 - - receptor like protein 35 [Arabidopsis thaliana]
3 Hb_003054_070 0.0623742079 transcription factor TF Family: Orphans DNA binding protein, putative [Ricinus communis]
4 Hb_000012_350 0.0791654308 transcription factor TF Family: HB PREDICTED: homeobox protein ATH1 [Jatropha curcas]
5 Hb_001427_100 0.0794680924 - - acc synthase, putative [Ricinus communis]
6 Hb_001117_050 0.0812374218 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
7 Hb_036520_030 0.0849392376 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
8 Hb_008221_200 0.0855126469 - - PREDICTED: protein trichome birefringence-like 41 [Jatropha curcas]
9 Hb_000620_040 0.0856065838 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
10 Hb_004032_290 0.0987299446 - - protein binding protein, putative [Ricinus communis]
11 Hb_009783_010 0.1005029833 - - PREDICTED: sulfated surface glycoprotein 185-like [Populus euphratica]
12 Hb_039946_060 0.1009524785 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
13 Hb_003032_030 0.1031038307 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
14 Hb_011853_020 0.1036940946 - - Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]
15 Hb_001136_040 0.1044787966 - - amino acid transporter, putative [Ricinus communis]
16 Hb_001794_040 0.1045663849 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
17 Hb_008054_030 0.1051646503 - - PREDICTED: VQ motif-containing protein 1-like [Jatropha curcas]
18 Hb_005542_120 0.107532864 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Jatropha curcas]
19 Hb_003339_010 0.107616048 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
20 Hb_000617_330 0.1086646107 - - PREDICTED: uncharacterized protein LOC105647507 [Jatropha curcas]

Gene co-expression network

sample Hb_010164_030 Hb_010164_030 Hb_147006_010 Hb_147006_010 Hb_010164_030--Hb_147006_010 Hb_003054_070 Hb_003054_070 Hb_010164_030--Hb_003054_070 Hb_000012_350 Hb_000012_350 Hb_010164_030--Hb_000012_350 Hb_001427_100 Hb_001427_100 Hb_010164_030--Hb_001427_100 Hb_001117_050 Hb_001117_050 Hb_010164_030--Hb_001117_050 Hb_036520_030 Hb_036520_030 Hb_010164_030--Hb_036520_030 Hb_000620_040 Hb_000620_040 Hb_147006_010--Hb_000620_040 Hb_133974_010 Hb_133974_010 Hb_147006_010--Hb_133974_010 Hb_003032_030 Hb_003032_030 Hb_147006_010--Hb_003032_030 Hb_015934_090 Hb_015934_090 Hb_147006_010--Hb_015934_090 Hb_004032_290 Hb_004032_290 Hb_147006_010--Hb_004032_290 Hb_003054_070--Hb_001117_050 Hb_003054_070--Hb_000012_350 Hb_008221_200 Hb_008221_200 Hb_003054_070--Hb_008221_200 Hb_003054_070--Hb_001427_100 Hb_003054_070--Hb_147006_010 Hb_001794_040 Hb_001794_040 Hb_000012_350--Hb_001794_040 Hb_011574_020 Hb_011574_020 Hb_000012_350--Hb_011574_020 Hb_020738_010 Hb_020738_010 Hb_000012_350--Hb_020738_010 Hb_000012_350--Hb_001427_100 Hb_000827_020 Hb_000827_020 Hb_000012_350--Hb_000827_020 Hb_039946_060 Hb_039946_060 Hb_001427_100--Hb_039946_060 Hb_001408_080 Hb_001408_080 Hb_001427_100--Hb_001408_080 Hb_005111_020 Hb_005111_020 Hb_001427_100--Hb_005111_020 Hb_000020_210 Hb_000020_210 Hb_001427_100--Hb_000020_210 Hb_005542_120 Hb_005542_120 Hb_001117_050--Hb_005542_120 Hb_001117_050--Hb_001794_040 Hb_008054_030 Hb_008054_030 Hb_001117_050--Hb_008054_030 Hb_000392_110 Hb_000392_110 Hb_001117_050--Hb_000392_110 Hb_001117_050--Hb_008221_200 Hb_036520_030--Hb_004032_290 Hb_036520_030--Hb_001408_080 Hb_036520_030--Hb_001427_100 Hb_002874_200 Hb_002874_200 Hb_036520_030--Hb_002874_200 Hb_003466_010 Hb_003466_010 Hb_036520_030--Hb_003466_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.148727 0.305282 0.71079 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.026092 0.380126

CAGE analysis