Hb_010172_080

Information

Type -
Description -
Location Contig10172: 72977-78675
Sequence    

Annotation

kegg
ID rcu:RCOM_1288590
description acetylglucosaminyltransferase, putative (EC:2.4.2.26)
nr
ID XP_002531062.1
description acetylglucosaminyltransferase, putative [Ricinus communis]
swissprot
ID Q5QQ50
description Xylosyltransferase 2 OS=Canis familiaris GN=XYLT2 PE=2 SV=1
trembl
ID B9SYJ3
description Acetylglucosaminyltransferase, putative OS=Ricinus communis GN=RCOM_1288590 PE=4 SV=1
Gene Ontology
ID GO:0016020
description xylosyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00817: 72820-73022 , PASA_asmbl_00818: 73082-77996
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010172_080 0.0 - - acetylglucosaminyltransferase, putative [Ricinus communis]
2 Hb_002774_060 0.0708132851 - - PREDICTED: uncharacterized protein LOC105630599 isoform X2 [Jatropha curcas]
3 Hb_005686_060 0.0712678386 - - PREDICTED: uncharacterized protein LOC101508199 [Cicer arietinum]
4 Hb_009773_020 0.078275826 - - PREDICTED: molybdopterin synthase sulfur carrier subunit [Jatropha curcas]
5 Hb_002078_150 0.0819829515 - - protein with unknown function [Ricinus communis]
6 Hb_004705_100 0.082889139 - - PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE [Jatropha curcas]
7 Hb_004324_310 0.0867917902 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000045_090 0.087400194 - - PREDICTED: syntaxin-31 [Jatropha curcas]
9 Hb_004545_060 0.0882343693 - - PREDICTED: trafficking protein particle complex subunit 6B [Jatropha curcas]
10 Hb_007594_030 0.0885557356 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
11 Hb_000103_560 0.0887776303 - - ADP-ribosylation factor, putative [Ricinus communis]
12 Hb_001377_290 0.0890208585 - - PREDICTED: cyclic pyranopterin monophosphate synthase accessory protein, mitochondrial [Jatropha curcas]
13 Hb_002811_360 0.0902868737 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
14 Hb_003055_120 0.0913485718 - - Protein C20orf11, putative [Ricinus communis]
15 Hb_000510_320 0.0928546854 - - PREDICTED: uncharacterized protein LOC105649907 [Jatropha curcas]
16 Hb_000329_030 0.0938240808 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
17 Hb_032208_090 0.0956989568 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
18 Hb_000579_140 0.0985738549 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000656_040 0.0986687821 - - PREDICTED: 25.3 kDa vesicle transport protein [Jatropha curcas]
20 Hb_001008_060 0.0993196114 - - PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_010172_080 Hb_010172_080 Hb_002774_060 Hb_002774_060 Hb_010172_080--Hb_002774_060 Hb_005686_060 Hb_005686_060 Hb_010172_080--Hb_005686_060 Hb_009773_020 Hb_009773_020 Hb_010172_080--Hb_009773_020 Hb_002078_150 Hb_002078_150 Hb_010172_080--Hb_002078_150 Hb_004705_100 Hb_004705_100 Hb_010172_080--Hb_004705_100 Hb_004324_310 Hb_004324_310 Hb_010172_080--Hb_004324_310 Hb_000045_090 Hb_000045_090 Hb_002774_060--Hb_000045_090 Hb_000329_030 Hb_000329_030 Hb_002774_060--Hb_000329_030 Hb_000656_040 Hb_000656_040 Hb_002774_060--Hb_000656_040 Hb_002774_060--Hb_004324_310 Hb_032208_090 Hb_032208_090 Hb_002774_060--Hb_032208_090 Hb_005686_060--Hb_004705_100 Hb_005686_060--Hb_000045_090 Hb_005686_060--Hb_009773_020 Hb_000510_130 Hb_000510_130 Hb_005686_060--Hb_000510_130 Hb_005686_060--Hb_002078_150 Hb_002030_040 Hb_002030_040 Hb_009773_020--Hb_002030_040 Hb_065525_020 Hb_065525_020 Hb_009773_020--Hb_065525_020 Hb_000103_560 Hb_000103_560 Hb_009773_020--Hb_000103_560 Hb_000840_030 Hb_000840_030 Hb_009773_020--Hb_000840_030 Hb_001105_070 Hb_001105_070 Hb_009773_020--Hb_001105_070 Hb_002301_140 Hb_002301_140 Hb_009773_020--Hb_002301_140 Hb_004128_190 Hb_004128_190 Hb_002078_150--Hb_004128_190 Hb_002078_150--Hb_000103_560 Hb_000398_180 Hb_000398_180 Hb_002078_150--Hb_000398_180 Hb_003847_080 Hb_003847_080 Hb_002078_150--Hb_003847_080 Hb_001377_290 Hb_001377_290 Hb_002078_150--Hb_001377_290 Hb_004545_060 Hb_004545_060 Hb_002078_150--Hb_004545_060 Hb_092337_010 Hb_092337_010 Hb_004705_100--Hb_092337_010 Hb_000700_110 Hb_000700_110 Hb_004705_100--Hb_000700_110 Hb_000692_220 Hb_000692_220 Hb_004705_100--Hb_000692_220 Hb_004705_100--Hb_009773_020 Hb_011689_080 Hb_011689_080 Hb_004324_310--Hb_011689_080 Hb_001195_690 Hb_001195_690 Hb_004324_310--Hb_001195_690 Hb_004324_310--Hb_002078_150 Hb_002105_090 Hb_002105_090 Hb_004324_310--Hb_002105_090 Hb_004324_310--Hb_001377_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.7993 4.47991 4.2469 10.1239 10.0658 13.2162
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.9328 13.2365 14.9193 5.47417 2.02918

CAGE analysis