Hb_010174_200

Information

Type -
Description -
Location Contig10174: 167066-170582
Sequence    

Annotation

kegg
ID rcu:RCOM_1082500
description hypothetical protein
nr
ID XP_012085590.1
description PREDICTED: uncharacterized protein LOC105644743 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17891 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00864: 166904-169487
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010174_200 0.0 - - PREDICTED: uncharacterized protein LOC105644743 isoform X1 [Jatropha curcas]
2 Hb_026050_010 0.0904221627 - - protein phosphatase 2c, putative [Ricinus communis]
3 Hb_081864_010 0.0935266961 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_007441_360 0.1015129983 - - PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
5 Hb_173107_020 0.1015950123 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
6 Hb_114733_010 0.1058596304 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
7 Hb_009771_040 0.1063434786 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
8 Hb_007292_050 0.1070440057 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
9 Hb_003581_050 0.1074442198 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-54 [Jatropha curcas]
10 Hb_001405_170 0.1090472391 - - aspartyl protease family protein [Populus trichocarpa]
11 Hb_000991_080 0.1112376354 - - kinase, putative [Ricinus communis]
12 Hb_003435_040 0.112966758 - - tonoplast intrinsic protein [Hevea brasiliensis]
13 Hb_005618_010 0.1133540364 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
14 Hb_002250_140 0.1153652147 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 isoform X1 [Populus euphratica]
15 Hb_024650_010 0.1155093056 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
16 Hb_000574_230 0.1194505204 - - PREDICTED: leucine-rich repeat receptor protein kinase EXS-like isoform X2 [Vitis vinifera]
17 Hb_000384_020 0.1195235861 - - sucrose phosphate syntase, putative [Ricinus communis]
18 Hb_009222_040 0.1212162168 transcription factor TF Family: C2C2-Dof DNA binding with one finger 2.4, putative [Theobroma cacao]
19 Hb_000020_210 0.1223408595 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
20 Hb_006736_040 0.1230549317 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]

Gene co-expression network

sample Hb_010174_200 Hb_010174_200 Hb_026050_010 Hb_026050_010 Hb_010174_200--Hb_026050_010 Hb_081864_010 Hb_081864_010 Hb_010174_200--Hb_081864_010 Hb_007441_360 Hb_007441_360 Hb_010174_200--Hb_007441_360 Hb_173107_020 Hb_173107_020 Hb_010174_200--Hb_173107_020 Hb_114733_010 Hb_114733_010 Hb_010174_200--Hb_114733_010 Hb_009771_040 Hb_009771_040 Hb_010174_200--Hb_009771_040 Hb_026050_010--Hb_009771_040 Hb_002250_140 Hb_002250_140 Hb_026050_010--Hb_002250_140 Hb_000574_230 Hb_000574_230 Hb_026050_010--Hb_000574_230 Hb_007257_070 Hb_007257_070 Hb_026050_010--Hb_007257_070 Hb_000258_230 Hb_000258_230 Hb_026050_010--Hb_000258_230 Hb_001405_170 Hb_001405_170 Hb_081864_010--Hb_001405_170 Hb_002960_030 Hb_002960_030 Hb_081864_010--Hb_002960_030 Hb_002053_190 Hb_002053_190 Hb_081864_010--Hb_002053_190 Hb_002762_100 Hb_002762_100 Hb_081864_010--Hb_002762_100 Hb_000020_210 Hb_000020_210 Hb_081864_010--Hb_000020_210 Hb_001269_240 Hb_001269_240 Hb_007441_360--Hb_001269_240 Hb_003581_050 Hb_003581_050 Hb_007441_360--Hb_003581_050 Hb_007441_360--Hb_000574_230 Hb_002097_130 Hb_002097_130 Hb_007441_360--Hb_002097_130 Hb_007441_360--Hb_007257_070 Hb_000384_020 Hb_000384_020 Hb_173107_020--Hb_000384_020 Hb_173107_020--Hb_114733_010 Hb_173107_020--Hb_002250_140 Hb_000991_080 Hb_000991_080 Hb_173107_020--Hb_000991_080 Hb_173107_020--Hb_009771_040 Hb_000045_080 Hb_000045_080 Hb_173107_020--Hb_000045_080 Hb_114733_010--Hb_000384_020 Hb_000816_150 Hb_000816_150 Hb_114733_010--Hb_000816_150 Hb_017700_030 Hb_017700_030 Hb_114733_010--Hb_017700_030 Hb_114733_010--Hb_000991_080 Hb_000732_100 Hb_000732_100 Hb_114733_010--Hb_000732_100 Hb_002168_070 Hb_002168_070 Hb_009771_040--Hb_002168_070 Hb_009771_040--Hb_002250_140 Hb_009771_040--Hb_000258_230 Hb_000434_060 Hb_000434_060 Hb_009771_040--Hb_000434_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0094115 14.8478 8.59051 22.4102 0 0.0614793
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.277971 0.117772 0.0958365 1.67932 9.18638

CAGE analysis