Hb_010175_050

Information

Type -
Description -
Location Contig10175: 49992-51134
Sequence    

Annotation

kegg
ID rcu:RCOM_0339130
description hypothetical protein
nr
ID XP_012079488.1
description PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAU5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12599 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010175_050 0.0 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
2 Hb_008341_010 0.1032307992 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X2 [Jatropha curcas]
3 Hb_005772_020 0.1110887653 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
4 Hb_019026_040 0.1149681778 - - S-locus lectin protein kinase family protein [Theobroma cacao]
5 Hb_004241_170 0.121228833 - - PREDICTED: uncharacterized protein LOC105633220 [Jatropha curcas]
6 Hb_003811_030 0.122256729 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
7 Hb_000230_250 0.1238244548 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
8 Hb_000032_590 0.1285563211 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
9 Hb_036492_020 0.1307177042 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
10 Hb_006358_030 0.1339641303 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
11 Hb_004800_140 0.1374232777 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
12 Hb_010091_030 0.138795528 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
13 Hb_004007_210 0.1448710552 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
14 Hb_004880_120 0.1450863511 - - PREDICTED: calcium-binding protein PBP1 [Jatropha curcas]
15 Hb_001631_110 0.1513059979 - - PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyltranspeptidase 1-like [Populus euphratica]
16 Hb_000656_260 0.1530068077 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
17 Hb_005054_320 0.1571855238 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
18 Hb_003929_040 0.158600043 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
19 Hb_005240_010 0.1612235779 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
20 Hb_002030_100 0.1617912862 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]

Gene co-expression network

sample Hb_010175_050 Hb_010175_050 Hb_008341_010 Hb_008341_010 Hb_010175_050--Hb_008341_010 Hb_005772_020 Hb_005772_020 Hb_010175_050--Hb_005772_020 Hb_019026_040 Hb_019026_040 Hb_010175_050--Hb_019026_040 Hb_004241_170 Hb_004241_170 Hb_010175_050--Hb_004241_170 Hb_003811_030 Hb_003811_030 Hb_010175_050--Hb_003811_030 Hb_000230_250 Hb_000230_250 Hb_010175_050--Hb_000230_250 Hb_008341_010--Hb_004241_170 Hb_001631_110 Hb_001631_110 Hb_008341_010--Hb_001631_110 Hb_010091_030 Hb_010091_030 Hb_008341_010--Hb_010091_030 Hb_004800_140 Hb_004800_140 Hb_008341_010--Hb_004800_140 Hb_000732_160 Hb_000732_160 Hb_008341_010--Hb_000732_160 Hb_005240_010 Hb_005240_010 Hb_005772_020--Hb_005240_010 Hb_000032_590 Hb_000032_590 Hb_005772_020--Hb_000032_590 Hb_006358_030 Hb_006358_030 Hb_005772_020--Hb_006358_030 Hb_171900_110 Hb_171900_110 Hb_005772_020--Hb_171900_110 Hb_005772_020--Hb_000230_250 Hb_019026_040--Hb_003811_030 Hb_107552_020 Hb_107552_020 Hb_019026_040--Hb_107552_020 Hb_000347_380 Hb_000347_380 Hb_019026_040--Hb_000347_380 Hb_036492_020 Hb_036492_020 Hb_019026_040--Hb_036492_020 Hb_004007_210 Hb_004007_210 Hb_019026_040--Hb_004007_210 Hb_004241_170--Hb_001631_110 Hb_004241_170--Hb_010091_030 Hb_004241_170--Hb_004800_140 Hb_004241_170--Hb_000732_160 Hb_006873_030 Hb_006873_030 Hb_003811_030--Hb_006873_030 Hb_003811_030--Hb_107552_020 Hb_003929_040 Hb_003929_040 Hb_003811_030--Hb_003929_040 Hb_003811_030--Hb_036492_020 Hb_004880_120 Hb_004880_120 Hb_000230_250--Hb_004880_120 Hb_010180_050 Hb_010180_050 Hb_000230_250--Hb_010180_050 Hb_000230_250--Hb_004007_210 Hb_000230_250--Hb_000032_590
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.87501 3.28295 0.670648 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0627805 0.149234 3.49136

CAGE analysis