Hb_010180_010

Information

Type -
Description -
Location Contig10180: 10779-11451
Sequence    

Annotation

kegg
ID cic:CICLE_v10029282mg
description hypothetical protein
nr
ID XP_012068494.1
description PREDICTED: uncharacterized protein LOC105631104 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXX0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03167 PE=4 SV=1
Gene Ontology
ID GO:0006635
description PREDICTED: uncharacterized protein LOC105631104

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00890: 10736-29748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010180_010 0.0 - - PREDICTED: uncharacterized protein LOC105631104 [Jatropha curcas]
2 Hb_143398_010 0.0537499281 - - PREDICTED: peter Pan-like protein [Jatropha curcas]
3 Hb_001998_230 0.0599137336 - - PREDICTED: coatomer subunit epsilon-1 [Jatropha curcas]
4 Hb_004306_020 0.0728572483 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
5 Hb_002890_140 0.0750148632 - - PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
6 Hb_000329_030 0.0751145863 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
7 Hb_010180_020 0.0758001413 - - hypothetical protein glysoja_030394 [Glycine soja]
8 Hb_004128_190 0.076615724 - - PREDICTED: dirigent protein 17-like [Jatropha curcas]
9 Hb_002477_330 0.0772572398 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Jatropha curcas]
10 Hb_000045_090 0.0777504754 - - PREDICTED: syntaxin-31 [Jatropha curcas]
11 Hb_002271_020 0.0798820629 - - hypothetical protein EUGRSUZ_G02641 [Eucalyptus grandis]
12 Hb_000103_090 0.081603446 - - PREDICTED: protein RDM1 [Jatropha curcas]
13 Hb_000363_500 0.0837163483 - - PREDICTED: EH domain-containing protein 1 isoform X2 [Jatropha curcas]
14 Hb_009557_070 0.0852298323 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002296_040 0.0855024418 - - PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha curcas]
16 Hb_004545_060 0.0859361518 - - PREDICTED: trafficking protein particle complex subunit 6B [Jatropha curcas]
17 Hb_002596_040 0.0859549647 - - PREDICTED: uncharacterized protein LOC105645264 isoform X2 [Jatropha curcas]
18 Hb_000815_040 0.0862157764 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]
19 Hb_000080_060 0.088730376 - - RNA polymerase I, II and III subunit RPB8, partial [Manihot esculenta]
20 Hb_001699_040 0.0892184806 - - PREDICTED: uncharacterized protein LOC105636529 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_010180_010 Hb_010180_010 Hb_143398_010 Hb_143398_010 Hb_010180_010--Hb_143398_010 Hb_001998_230 Hb_001998_230 Hb_010180_010--Hb_001998_230 Hb_004306_020 Hb_004306_020 Hb_010180_010--Hb_004306_020 Hb_002890_140 Hb_002890_140 Hb_010180_010--Hb_002890_140 Hb_000329_030 Hb_000329_030 Hb_010180_010--Hb_000329_030 Hb_010180_020 Hb_010180_020 Hb_010180_010--Hb_010180_020 Hb_002271_020 Hb_002271_020 Hb_143398_010--Hb_002271_020 Hb_009557_070 Hb_009557_070 Hb_143398_010--Hb_009557_070 Hb_002473_130 Hb_002473_130 Hb_143398_010--Hb_002473_130 Hb_000045_090 Hb_000045_090 Hb_143398_010--Hb_000045_090 Hb_143398_010--Hb_000329_030 Hb_002112_040 Hb_002112_040 Hb_001998_230--Hb_002112_040 Hb_004072_020 Hb_004072_020 Hb_001998_230--Hb_004072_020 Hb_024714_100 Hb_024714_100 Hb_001998_230--Hb_024714_100 Hb_000363_500 Hb_000363_500 Hb_001998_230--Hb_000363_500 Hb_012799_160 Hb_012799_160 Hb_001998_230--Hb_012799_160 Hb_004306_020--Hb_010180_020 Hb_004545_060 Hb_004545_060 Hb_004306_020--Hb_004545_060 Hb_002207_110 Hb_002207_110 Hb_004306_020--Hb_002207_110 Hb_000024_080 Hb_000024_080 Hb_004306_020--Hb_000024_080 Hb_005686_060 Hb_005686_060 Hb_004306_020--Hb_005686_060 Hb_000815_040 Hb_000815_040 Hb_002890_140--Hb_000815_040 Hb_000103_090 Hb_000103_090 Hb_002890_140--Hb_000103_090 Hb_000103_560 Hb_000103_560 Hb_002890_140--Hb_000103_560 Hb_000529_190 Hb_000529_190 Hb_002890_140--Hb_000529_190 Hb_033834_040 Hb_033834_040 Hb_002890_140--Hb_033834_040 Hb_000832_140 Hb_000832_140 Hb_002890_140--Hb_000832_140 Hb_000329_030--Hb_009557_070 Hb_002774_060 Hb_002774_060 Hb_000329_030--Hb_002774_060 Hb_000656_040 Hb_000656_040 Hb_000329_030--Hb_000656_040 Hb_000329_030--Hb_000045_090 Hb_000579_140 Hb_000579_140 Hb_000329_030--Hb_000579_140 Hb_001604_080 Hb_001604_080 Hb_010180_020--Hb_001604_080 Hb_010180_020--Hb_004545_060 Hb_002411_170 Hb_002411_170 Hb_010180_020--Hb_002411_170 Hb_010180_020--Hb_000024_080 Hb_010180_020--Hb_000815_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
64.7788 20.7633 30.8771 69.7722 52.6426 110.567
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
94.6803 93.0424 52.4511 43.0984 25.9966

CAGE analysis