Hb_010252_010

Information

Type -
Description -
Location Contig10252: 10561-11797
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010252_010 0.0 - - -
2 Hb_002163_070 0.0180693403 - - hypothetical protein JCGZ_13728 [Jatropha curcas]
3 Hb_009083_020 0.0303780635 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
4 Hb_160950_010 0.037645807 - - PREDICTED: uncharacterized protein LOC105761043 [Gossypium raimondii]
5 Hb_119583_030 0.046571724 - - unnamed protein product [Vitis vinifera]
6 Hb_000025_800 0.0551430106 - - hypothetical protein VITISV_020143 [Vitis vinifera]
7 Hb_185437_010 0.0577018096 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
8 Hb_137862_020 0.0595106596 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
9 Hb_039440_010 0.0633322323 - - conserved hypothetical protein [Ricinus communis]
10 Hb_057721_010 0.0712412116 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
11 Hb_001518_050 0.0738460646 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
12 Hb_000248_080 0.0745648843 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_149194_010 0.0994659343 - - hypothetical protein JCGZ_17021 [Jatropha curcas]
14 Hb_136973_020 0.1007142101 - - -
15 Hb_023712_020 0.1031410817 transcription factor TF Family: ERF hypothetical protein JCGZ_20669 [Jatropha curcas]
16 Hb_000170_260 0.1083996667 - - amino acid transporter, putative [Ricinus communis]
17 Hb_000483_120 0.1113275413 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
18 Hb_005773_010 0.1115696263 - - -
19 Hb_177179_020 0.1187885371 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000072_010 0.1193678451 - - hypothetical protein B456_006G246700 [Gossypium raimondii]

Gene co-expression network

sample Hb_010252_010 Hb_010252_010 Hb_002163_070 Hb_002163_070 Hb_010252_010--Hb_002163_070 Hb_009083_020 Hb_009083_020 Hb_010252_010--Hb_009083_020 Hb_160950_010 Hb_160950_010 Hb_010252_010--Hb_160950_010 Hb_119583_030 Hb_119583_030 Hb_010252_010--Hb_119583_030 Hb_000025_800 Hb_000025_800 Hb_010252_010--Hb_000025_800 Hb_185437_010 Hb_185437_010 Hb_010252_010--Hb_185437_010 Hb_002163_070--Hb_009083_020 Hb_137862_020 Hb_137862_020 Hb_002163_070--Hb_137862_020 Hb_002163_070--Hb_160950_010 Hb_002163_070--Hb_119583_030 Hb_000248_080 Hb_000248_080 Hb_002163_070--Hb_000248_080 Hb_009083_020--Hb_160950_010 Hb_009083_020--Hb_000248_080 Hb_009083_020--Hb_137862_020 Hb_039440_010 Hb_039440_010 Hb_009083_020--Hb_039440_010 Hb_160950_010--Hb_039440_010 Hb_160950_010--Hb_000248_080 Hb_160950_010--Hb_185437_010 Hb_119583_030--Hb_000025_800 Hb_057721_010 Hb_057721_010 Hb_119583_030--Hb_057721_010 Hb_119583_030--Hb_185437_010 Hb_000483_120 Hb_000483_120 Hb_119583_030--Hb_000483_120 Hb_000025_800--Hb_185437_010 Hb_001518_050 Hb_001518_050 Hb_000025_800--Hb_001518_050 Hb_000025_800--Hb_002163_070 Hb_000025_800--Hb_057721_010 Hb_185437_010--Hb_001518_050 Hb_185437_010--Hb_039440_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0684043 0.13789 0.186158 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis