Hb_010253_010

Information

Type -
Description -
Location Contig10253: 17628-18467
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_006858751.2
description PREDICTED: 2-alkenal reductase (NADP(+)-dependent) [Amborella trichopoda]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010253_010 0.0 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent) [Amborella trichopoda]
2 Hb_043903_010 0.1217317403 - - PREDICTED: protein kinase 2B, chloroplastic-like [Tarenaya hassleriana]
3 Hb_000375_040 0.1248679065 transcription factor TF Family: MYB-related PREDICTED: myb-related protein 308-like [Populus euphratica]
4 Hb_000405_040 0.125090244 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
5 Hb_003446_030 0.1331079318 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
6 Hb_008953_010 0.1335211923 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X2 [Solanum lycopersicum]
7 Hb_017987_010 0.1373811146 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like isoform X1 [Populus euphratica]
8 Hb_004254_070 0.1420064109 transcription factor TF Family: NAC hypothetical protein POPTR_0015s03700g [Populus trichocarpa]
9 Hb_014034_020 0.142152522 - - hypothetical protein POPTR_0075s00200g, partial [Populus trichocarpa]
10 Hb_000229_080 0.1437047676 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
11 Hb_000500_190 0.1447791887 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
12 Hb_020480_050 0.1448122088 - - putative wall-associated kinase family protein [Populus trichocarpa]
13 Hb_071381_010 0.1471002088 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
14 Hb_000446_100 0.1474098261 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
15 Hb_000155_140 0.1488530185 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_000828_030 0.1493378072 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
17 Hb_001456_040 0.1509884878 - - NAD dependent epimerase/dehydratase, putative [Ricinus communis]
18 Hb_000025_250 0.1511968251 - - PREDICTED: flavonoid 3',5'-hydroxylase 2-like [Jatropha curcas]
19 Hb_002161_020 0.152899898 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
20 Hb_003891_060 0.1551412566 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Glycine max]

Gene co-expression network

sample Hb_010253_010 Hb_010253_010 Hb_043903_010 Hb_043903_010 Hb_010253_010--Hb_043903_010 Hb_000375_040 Hb_000375_040 Hb_010253_010--Hb_000375_040 Hb_000405_040 Hb_000405_040 Hb_010253_010--Hb_000405_040 Hb_003446_030 Hb_003446_030 Hb_010253_010--Hb_003446_030 Hb_008953_010 Hb_008953_010 Hb_010253_010--Hb_008953_010 Hb_017987_010 Hb_017987_010 Hb_010253_010--Hb_017987_010 Hb_043903_010--Hb_000375_040 Hb_043903_010--Hb_008953_010 Hb_000828_030 Hb_000828_030 Hb_043903_010--Hb_000828_030 Hb_004981_020 Hb_004981_020 Hb_043903_010--Hb_004981_020 Hb_143766_040 Hb_143766_040 Hb_043903_010--Hb_143766_040 Hb_007337_010 Hb_007337_010 Hb_043903_010--Hb_007337_010 Hb_000375_040--Hb_008953_010 Hb_000375_040--Hb_000828_030 Hb_081224_010 Hb_081224_010 Hb_000375_040--Hb_081224_010 Hb_187247_010 Hb_187247_010 Hb_000375_040--Hb_187247_010 Hb_061590_010 Hb_061590_010 Hb_000375_040--Hb_061590_010 Hb_014034_020 Hb_014034_020 Hb_000405_040--Hb_014034_020 Hb_000025_250 Hb_000025_250 Hb_000405_040--Hb_000025_250 Hb_071381_010 Hb_071381_010 Hb_000405_040--Hb_071381_010 Hb_001032_060 Hb_001032_060 Hb_000405_040--Hb_001032_060 Hb_004254_070 Hb_004254_070 Hb_000405_040--Hb_004254_070 Hb_000229_080 Hb_000229_080 Hb_000405_040--Hb_000229_080 Hb_003446_030--Hb_001032_060 Hb_028013_010 Hb_028013_010 Hb_003446_030--Hb_028013_010 Hb_145535_010 Hb_145535_010 Hb_003446_030--Hb_145535_010 Hb_018709_010 Hb_018709_010 Hb_003446_030--Hb_018709_010 Hb_000419_080 Hb_000419_080 Hb_003446_030--Hb_000419_080 Hb_000445_020 Hb_000445_020 Hb_003446_030--Hb_000445_020 Hb_008953_010--Hb_000828_030 Hb_008953_010--Hb_081224_010 Hb_005726_030 Hb_005726_030 Hb_008953_010--Hb_005726_030 Hb_008953_010--Hb_061590_010 Hb_000684_060 Hb_000684_060 Hb_017987_010--Hb_000684_060 Hb_007926_020 Hb_007926_020 Hb_017987_010--Hb_007926_020 Hb_148986_010 Hb_148986_010 Hb_017987_010--Hb_148986_010 Hb_017987_010--Hb_008953_010 Hb_003857_010 Hb_003857_010 Hb_017987_010--Hb_003857_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.219565 0.174317 0 0 0.160143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.49357 0

CAGE analysis