Hb_010267_020

Information

Type -
Description -
Location Contig10267: 16005-17374
Sequence    

Annotation

kegg
ID rcu:RCOM_0059350
description diphosphoinositol polyphosphate phosphohydrolase, putative
nr
ID XP_002531008.1
description diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
swissprot
ID Q9ZU95
description Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1
trembl
ID B9SYD9
description Diphosphoinositol polyphosphate phosphohydrolase, putative OS=Ricinus communis GN=RCOM_0059350 PE=3 SV=1
Gene Ontology
ID GO:0016787
description nudix hydrolase mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01120: 17199-17490
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010267_020 0.0 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
2 Hb_000200_270 0.0775392186 - - PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Jatropha curcas]
3 Hb_169753_010 0.0892837615 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
4 Hb_002918_220 0.0911018389 - - PREDICTED: uncharacterized protein LOC105138896 [Populus euphratica]
5 Hb_005568_140 0.0950833071 - - ATP binding protein, putative [Ricinus communis]
6 Hb_004422_030 0.0974733046 - - PREDICTED: serine/threonine-protein kinase SAPK7-like [Jatropha curcas]
7 Hb_005695_070 0.0990975268 - - Cysteine-rich RLK 29 [Theobroma cacao]
8 Hb_012753_150 0.1099633434 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
9 Hb_004109_100 0.1106973565 - - Interactor of constitutive active rops 1 isoform 1 [Theobroma cacao]
10 Hb_022406_010 0.111565342 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_002205_160 0.1175449196 - - chalcone isomerase [Hibiscus cannabinus]
12 Hb_149985_030 0.1205405356 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
13 Hb_003767_030 0.1215332361 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
14 Hb_001913_070 0.1219114087 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
15 Hb_003992_130 0.1222686506 - - unnamed protein product [Vitis vinifera]
16 Hb_006519_020 0.1232408195 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
17 Hb_009421_090 0.1234429821 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
18 Hb_007441_290 0.1247651635 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
19 Hb_001571_080 0.1247844356 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
20 Hb_002170_060 0.1257705167 - - PREDICTED: mitogen-activated protein kinase-binding protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_010267_020 Hb_010267_020 Hb_000200_270 Hb_000200_270 Hb_010267_020--Hb_000200_270 Hb_169753_010 Hb_169753_010 Hb_010267_020--Hb_169753_010 Hb_002918_220 Hb_002918_220 Hb_010267_020--Hb_002918_220 Hb_005568_140 Hb_005568_140 Hb_010267_020--Hb_005568_140 Hb_004422_030 Hb_004422_030 Hb_010267_020--Hb_004422_030 Hb_005695_070 Hb_005695_070 Hb_010267_020--Hb_005695_070 Hb_000856_230 Hb_000856_230 Hb_000200_270--Hb_000856_230 Hb_000200_270--Hb_002918_220 Hb_000200_270--Hb_005695_070 Hb_002311_500 Hb_002311_500 Hb_000200_270--Hb_002311_500 Hb_009421_090 Hb_009421_090 Hb_000200_270--Hb_009421_090 Hb_002205_160 Hb_002205_160 Hb_169753_010--Hb_002205_160 Hb_007441_290 Hb_007441_290 Hb_169753_010--Hb_007441_290 Hb_006519_020 Hb_006519_020 Hb_169753_010--Hb_006519_020 Hb_004007_080 Hb_004007_080 Hb_169753_010--Hb_004007_080 Hb_169753_010--Hb_004422_030 Hb_002918_220--Hb_005568_140 Hb_004109_100 Hb_004109_100 Hb_002918_220--Hb_004109_100 Hb_002918_220--Hb_004422_030 Hb_001571_080 Hb_001571_080 Hb_002918_220--Hb_001571_080 Hb_001439_240 Hb_001439_240 Hb_002918_220--Hb_001439_240 Hb_005568_140--Hb_004109_100 Hb_005568_140--Hb_001571_080 Hb_002170_060 Hb_002170_060 Hb_005568_140--Hb_002170_060 Hb_005568_140--Hb_004422_030 Hb_004225_160 Hb_004225_160 Hb_004422_030--Hb_004225_160 Hb_000083_280 Hb_000083_280 Hb_004422_030--Hb_000083_280 Hb_004422_030--Hb_001439_240 Hb_039812_010 Hb_039812_010 Hb_004422_030--Hb_039812_010 Hb_149985_030 Hb_149985_030 Hb_005695_070--Hb_149985_030 Hb_001001_010 Hb_001001_010 Hb_005695_070--Hb_001001_010 Hb_000349_170 Hb_000349_170 Hb_005695_070--Hb_000349_170 Hb_022406_010 Hb_022406_010 Hb_005695_070--Hb_022406_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0358712 12.1035 98.2572 27.2979 0 0.142752
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0651552 0.348083 3.5816 10.6724

CAGE analysis