Hb_010315_080

Information

Type -
Description -
Location Contig10315: 72760-80375
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010315_080 0.0 - - -
2 Hb_008173_150 0.1944041436 - - PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
3 Hb_005725_040 0.2169784181 - - -
4 Hb_029622_030 0.2217554413 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_001409_060 0.2218366843 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
6 Hb_003750_130 0.222617271 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000107_480 0.2248606893 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 6-like isoform X1 [Jatropha curcas]
8 Hb_001638_330 0.2267427756 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR3 isoform X1 [Jatropha curcas]
9 Hb_000673_010 0.2273956974 - - PREDICTED: uncharacterized protein LOC105636554 isoform X1 [Jatropha curcas]
10 Hb_000203_200 0.2302089675 - - Pollen allergen Che a 1 precursor, putative [Ricinus communis]
11 Hb_005332_140 0.2325678491 - - PREDICTED: uncharacterized membrane protein At3g27390 isoform X2 [Jatropha curcas]
12 Hb_124677_040 0.2352411923 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
13 Hb_003408_060 0.2371486583 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
14 Hb_102948_010 0.2377805112 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
15 Hb_005725_030 0.237817994 - - PREDICTED: U-box domain-containing protein 27-like [Beta vulgaris subsp. vulgaris]
16 Hb_003581_280 0.2383415096 - - KINASE 2B family protein [Populus trichocarpa]
17 Hb_027445_100 0.2391092201 - - PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Jatropha curcas]
18 Hb_104920_010 0.2392326452 - - hypothetical protein VITISV_031859 [Vitis vinifera]
19 Hb_002928_140 0.2394565171 - - PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Jatropha curcas]
20 Hb_022378_010 0.2398855879 - - PREDICTED: uncharacterized protein LOC105634715 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_010315_080 Hb_010315_080 Hb_008173_150 Hb_008173_150 Hb_010315_080--Hb_008173_150 Hb_005725_040 Hb_005725_040 Hb_010315_080--Hb_005725_040 Hb_029622_030 Hb_029622_030 Hb_010315_080--Hb_029622_030 Hb_001409_060 Hb_001409_060 Hb_010315_080--Hb_001409_060 Hb_003750_130 Hb_003750_130 Hb_010315_080--Hb_003750_130 Hb_000107_480 Hb_000107_480 Hb_010315_080--Hb_000107_480 Hb_001638_330 Hb_001638_330 Hb_008173_150--Hb_001638_330 Hb_002435_100 Hb_002435_100 Hb_008173_150--Hb_002435_100 Hb_000673_010 Hb_000673_010 Hb_008173_150--Hb_000673_010 Hb_001160_100 Hb_001160_100 Hb_008173_150--Hb_001160_100 Hb_026048_110 Hb_026048_110 Hb_008173_150--Hb_026048_110 Hb_008173_150--Hb_001409_060 Hb_002107_090 Hb_002107_090 Hb_005725_040--Hb_002107_090 Hb_005725_040--Hb_029622_030 Hb_005194_040 Hb_005194_040 Hb_005725_040--Hb_005194_040 Hb_000152_760 Hb_000152_760 Hb_005725_040--Hb_000152_760 Hb_000212_300 Hb_000212_300 Hb_005725_040--Hb_000212_300 Hb_015026_020 Hb_015026_020 Hb_029622_030--Hb_015026_020 Hb_000928_250 Hb_000928_250 Hb_029622_030--Hb_000928_250 Hb_000424_070 Hb_000424_070 Hb_029622_030--Hb_000424_070 Hb_003106_200 Hb_003106_200 Hb_029622_030--Hb_003106_200 Hb_000345_290 Hb_000345_290 Hb_029622_030--Hb_000345_290 Hb_029622_030--Hb_000212_300 Hb_102948_010 Hb_102948_010 Hb_001409_060--Hb_102948_010 Hb_001766_070 Hb_001766_070 Hb_001409_060--Hb_001766_070 Hb_002218_020 Hb_002218_020 Hb_001409_060--Hb_002218_020 Hb_001409_060--Hb_000673_010 Hb_000663_080 Hb_000663_080 Hb_001409_060--Hb_000663_080 Hb_001430_020 Hb_001430_020 Hb_001409_060--Hb_001430_020 Hb_000170_160 Hb_000170_160 Hb_003750_130--Hb_000170_160 Hb_001277_340 Hb_001277_340 Hb_003750_130--Hb_001277_340 Hb_003750_130--Hb_000673_010 Hb_003750_130--Hb_001766_070 Hb_001828_120 Hb_001828_120 Hb_003750_130--Hb_001828_120 Hb_000008_280 Hb_000008_280 Hb_003750_130--Hb_000008_280 Hb_005725_030 Hb_005725_030 Hb_000107_480--Hb_005725_030 Hb_013405_150 Hb_013405_150 Hb_000107_480--Hb_013405_150 Hb_000107_480--Hb_001409_060 Hb_002056_100 Hb_002056_100 Hb_000107_480--Hb_002056_100 Hb_000120_380 Hb_000120_380 Hb_000107_480--Hb_000120_380 Hb_000107_480--Hb_000663_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.318331 0.307579 0.0960104 0.0975878 0.058664
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.152702 0.0600264 0.107603 0.02438 0.238631

CAGE analysis