Hb_010320_030

Information

Type -
Description -
Location Contig10320: 31092-33874
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021229mg
description hypothetical protein
nr
ID XP_007213082.1
description hypothetical protein PRUPE_ppa021229mg [Prunus persica]
swissprot
ID Q99315
description Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3
trembl
ID M5WLY8
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010320_030 0.0 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
2 Hb_085636_010 0.0695871845 - - PREDICTED: uncharacterized protein LOC105636643 [Jatropha curcas]
3 Hb_000359_240 0.1775440067 - - PREDICTED: uncharacterized protein LOC105646039 [Jatropha curcas]
4 Hb_062135_010 0.1814610858 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]
5 Hb_014556_020 0.2722877018 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_000317_360 0.2813110005 - - PREDICTED: GDSL esterase/lipase At5g08460 [Jatropha curcas]
7 Hb_001377_390 0.2817886947 - - hypothetical protein POPTR_0002s17390g [Populus trichocarpa]
8 Hb_001995_020 0.2875165621 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
9 Hb_000496_090 0.3010387333 - - PREDICTED: inhibitor of trypsin and hageman factor-like [Gossypium raimondii]
10 Hb_001369_280 0.3022230002 - - PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X3 [Solanum tuberosum]
11 Hb_036790_010 0.3051098465 - - PREDICTED: GDSL esterase/lipase 1-like [Jatropha curcas]
12 Hb_022137_030 0.3188963952 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
13 Hb_002740_020 0.3217566514 - - -
14 Hb_115472_010 0.3234344464 - - -
15 Hb_172503_010 0.3290159849 - - PREDICTED: uncharacterized protein LOC105647154 [Jatropha curcas]
16 Hb_103832_030 0.3293262972 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
17 Hb_083103_030 0.3308396828 - - putative retrotransposon protein [Malus domestica]
18 Hb_000252_140 0.3440968113 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_021943_030 0.3501097076 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_001268_130 0.3512600127 - - hypothetical protein JCGZ_26837 [Jatropha curcas]

Gene co-expression network

sample Hb_010320_030 Hb_010320_030 Hb_085636_010 Hb_085636_010 Hb_010320_030--Hb_085636_010 Hb_000359_240 Hb_000359_240 Hb_010320_030--Hb_000359_240 Hb_062135_010 Hb_062135_010 Hb_010320_030--Hb_062135_010 Hb_014556_020 Hb_014556_020 Hb_010320_030--Hb_014556_020 Hb_000317_360 Hb_000317_360 Hb_010320_030--Hb_000317_360 Hb_001377_390 Hb_001377_390 Hb_010320_030--Hb_001377_390 Hb_085636_010--Hb_000359_240 Hb_085636_010--Hb_062135_010 Hb_085636_010--Hb_000317_360 Hb_000496_090 Hb_000496_090 Hb_085636_010--Hb_000496_090 Hb_001369_280 Hb_001369_280 Hb_085636_010--Hb_001369_280 Hb_000359_240--Hb_062135_010 Hb_000359_240--Hb_001377_390 Hb_000359_240--Hb_014556_020 Hb_000252_140 Hb_000252_140 Hb_000359_240--Hb_000252_140 Hb_062135_010--Hb_001377_390 Hb_062135_010--Hb_014556_020 Hb_062135_010--Hb_000252_140 Hb_014556_020--Hb_001377_390 Hb_014556_020--Hb_000252_140 Hb_003554_020 Hb_003554_020 Hb_014556_020--Hb_003554_020 Hb_105328_030 Hb_105328_030 Hb_000317_360--Hb_105328_030 Hb_080147_100 Hb_080147_100 Hb_000317_360--Hb_080147_100 Hb_000645_110 Hb_000645_110 Hb_000317_360--Hb_000645_110 Hb_006420_090 Hb_006420_090 Hb_000317_360--Hb_006420_090 Hb_001377_390--Hb_000252_140 Hb_001377_390--Hb_003554_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.00717312
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0136425 0 0.0216671 0

CAGE analysis