Hb_010368_040

Information

Type -
Description -
Location Contig10368: 26145-26668
Sequence    

Annotation

kegg
ID rcu:RCOM_1442340
description hypothetical protein
nr
ID XP_002512748.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RGN9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442340 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010368_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001190_020 0.0874728507 - - ankyrin repeat-containing protein, putative [Ricinus communis]
3 Hb_004059_010 0.0879540229 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
4 Hb_006519_010 0.0944231692 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
5 Hb_039757_010 0.0951235617 - - -
6 Hb_001405_180 0.0957927368 - - zinc finger protein, putative [Ricinus communis]
7 Hb_009897_030 0.1002255211 - - -
8 Hb_000426_060 0.1035519451 - - hypothetical protein CISIN_1g048192mg, partial [Citrus sinensis]
9 Hb_001693_030 0.1045800905 - - PREDICTED: reticuline oxidase-like [Jatropha curcas]
10 Hb_002851_050 0.1074171213 transcription factor TF Family: MYB-related myb family transcription factor family protein [Populus trichocarpa]
11 Hb_000994_090 0.1108763649 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
12 Hb_007371_010 0.111902919 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
13 Hb_000426_070 0.1134069557 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
14 Hb_000592_040 0.1138822602 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004767_040 0.1152339833 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
16 Hb_000879_100 0.1178822485 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
17 Hb_000499_050 0.1199494799 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_007943_040 0.1208142208 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
19 Hb_001510_050 0.1225719892 - - zinc finger protein, putative [Ricinus communis]
20 Hb_013057_010 0.1256337816 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]

Gene co-expression network

sample Hb_010368_040 Hb_010368_040 Hb_001190_020 Hb_001190_020 Hb_010368_040--Hb_001190_020 Hb_004059_010 Hb_004059_010 Hb_010368_040--Hb_004059_010 Hb_006519_010 Hb_006519_010 Hb_010368_040--Hb_006519_010 Hb_039757_010 Hb_039757_010 Hb_010368_040--Hb_039757_010 Hb_001405_180 Hb_001405_180 Hb_010368_040--Hb_001405_180 Hb_009897_030 Hb_009897_030 Hb_010368_040--Hb_009897_030 Hb_001190_020--Hb_006519_010 Hb_000959_290 Hb_000959_290 Hb_001190_020--Hb_000959_290 Hb_027913_010 Hb_027913_010 Hb_001190_020--Hb_027913_010 Hb_001190_020--Hb_004059_010 Hb_004994_070 Hb_004994_070 Hb_001190_020--Hb_004994_070 Hb_000215_120 Hb_000215_120 Hb_004059_010--Hb_000215_120 Hb_001796_010 Hb_001796_010 Hb_004059_010--Hb_001796_010 Hb_000879_100 Hb_000879_100 Hb_004059_010--Hb_000879_100 Hb_004059_010--Hb_006519_010 Hb_006519_010--Hb_000959_290 Hb_006519_010--Hb_004994_070 Hb_093204_010 Hb_093204_010 Hb_006519_010--Hb_093204_010 Hb_004767_040 Hb_004767_040 Hb_006519_010--Hb_004767_040 Hb_002572_060 Hb_002572_060 Hb_006519_010--Hb_002572_060 Hb_039757_010--Hb_001405_180 Hb_000426_060 Hb_000426_060 Hb_039757_010--Hb_000426_060 Hb_002851_050 Hb_002851_050 Hb_039757_010--Hb_002851_050 Hb_000994_090 Hb_000994_090 Hb_039757_010--Hb_000994_090 Hb_039757_010--Hb_009897_030 Hb_000426_070 Hb_000426_070 Hb_039757_010--Hb_000426_070 Hb_001405_180--Hb_000426_060 Hb_001405_180--Hb_002851_050 Hb_001405_180--Hb_000994_090 Hb_001405_180--Hb_000426_070 Hb_000592_040 Hb_000592_040 Hb_001405_180--Hb_000592_040 Hb_007943_040 Hb_007943_040 Hb_009897_030--Hb_007943_040 Hb_009897_030--Hb_001405_180 Hb_009897_030--Hb_004767_040 Hb_009897_030--Hb_000426_060 Hb_011980_020 Hb_011980_020 Hb_009897_030--Hb_011980_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 8.70572 0 0.796543 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.170058 0

CAGE analysis