Hb_010369_010

Information

Type -
Description -
Location Contig10369: 23125-23385
Sequence    

Annotation

kegg
ID rcu:RCOM_0373660
description hypothetical protein
nr
ID XP_002532075.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T1F7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0373660 PE=4 SV=1
Gene Ontology
ID GO:0001101
description conserved hypothetical protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010369_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000769_030 0.079508903 - - ankyrin repeat-containing protein, putative [Ricinus communis]
3 Hb_128460_020 0.0819276401 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
4 Hb_014361_140 0.0869397693 - - PREDICTED: peroxidase 51 [Jatropha curcas]
5 Hb_053935_010 0.0891463543 - - hypothetical protein EUGRSUZ_G02294 [Eucalyptus grandis]
6 Hb_011429_010 0.0913945457 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
7 Hb_158110_010 0.0924463756 - - hypothetical protein CICLE_v10012017mg [Citrus clementina]
8 Hb_000373_220 0.0955182451 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
9 Hb_000358_170 0.0972362844 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor TINY-like [Jatropha curcas]
10 Hb_000061_060 0.0995377889 transcription factor TF Family: MYB-related transcription factor MYB28 [Arabidopsis thaliana]
11 Hb_098175_010 0.1104285805 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
12 Hb_004724_290 0.1136812354 transcription factor TF Family: NAC -
13 Hb_001257_120 0.1144235348 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
14 Hb_004241_190 0.1151168548 - - -
15 Hb_000203_090 0.1222249667 - - hypothetical protein POPTR_0013s04080g [Populus trichocarpa]
16 Hb_006916_220 0.1224601049 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
17 Hb_184752_010 0.1326680035 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
18 Hb_000731_020 0.1331041036 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
19 Hb_104855_010 0.1338499841 - - -
20 Hb_008963_010 0.1366013653 desease resistance Gene Name: LRR_4 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_010369_010 Hb_010369_010 Hb_000769_030 Hb_000769_030 Hb_010369_010--Hb_000769_030 Hb_128460_020 Hb_128460_020 Hb_010369_010--Hb_128460_020 Hb_014361_140 Hb_014361_140 Hb_010369_010--Hb_014361_140 Hb_053935_010 Hb_053935_010 Hb_010369_010--Hb_053935_010 Hb_011429_010 Hb_011429_010 Hb_010369_010--Hb_011429_010 Hb_158110_010 Hb_158110_010 Hb_010369_010--Hb_158110_010 Hb_000769_030--Hb_011429_010 Hb_000769_030--Hb_128460_020 Hb_000769_030--Hb_014361_140 Hb_000769_030--Hb_053935_010 Hb_004724_290 Hb_004724_290 Hb_000769_030--Hb_004724_290 Hb_128460_020--Hb_014361_140 Hb_128460_020--Hb_053935_010 Hb_000061_060 Hb_000061_060 Hb_128460_020--Hb_000061_060 Hb_000373_220 Hb_000373_220 Hb_128460_020--Hb_000373_220 Hb_004241_190 Hb_004241_190 Hb_128460_020--Hb_004241_190 Hb_128460_020--Hb_158110_010 Hb_014361_140--Hb_000061_060 Hb_014361_140--Hb_053935_010 Hb_104855_010 Hb_104855_010 Hb_014361_140--Hb_104855_010 Hb_014361_140--Hb_158110_010 Hb_014361_140--Hb_004241_190 Hb_053935_010--Hb_000373_220 Hb_053935_010--Hb_004241_190 Hb_053935_010--Hb_000061_060 Hb_053935_010--Hb_158110_010 Hb_011429_010--Hb_004724_290 Hb_098175_010 Hb_098175_010 Hb_011429_010--Hb_098175_010 Hb_011429_010--Hb_128460_020 Hb_003602_080 Hb_003602_080 Hb_011429_010--Hb_003602_080 Hb_158110_010--Hb_000061_060 Hb_158110_010--Hb_004241_190 Hb_158110_010--Hb_000373_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 66.795 27.4096 59.6145 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.868246 0 0.203221 0.611321

CAGE analysis