Hb_010381_120

Information

Type -
Description -
Location Contig10381: 102692-108253
Sequence    

Annotation

kegg
ID rcu:RCOM_0312960
description ATP binding protein, putative
nr
ID XP_012069004.1
description PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
swissprot
ID Q9SX31
description Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1
trembl
ID A0A067L0Q4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24792 PE=4 SV=1
Gene Ontology
ID GO:0004672
description inactive protein kinase selmodraft_444075-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01437: 102703-105341 , PASA_asmbl_01438: 105408-106056 , PASA_asmbl_01439: 106124-107793
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010381_120 0.0 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
2 Hb_000494_040 0.092916334 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
3 Hb_001689_020 0.0996180765 - - hypothetical protein JCGZ_10660 [Jatropha curcas]
4 Hb_002107_160 0.1000216461 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
5 Hb_005862_010 0.1021359189 - - PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Jatropha curcas]
6 Hb_002529_060 0.1028328684 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282107 [Jatropha curcas]
7 Hb_005016_170 0.1071622199 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002495_040 0.1085550735 - - PREDICTED: chaperone protein dnaJ 6 isoform X1 [Jatropha curcas]
9 Hb_000364_060 0.1110239111 - - JHL03K20.4 [Jatropha curcas]
10 Hb_003688_130 0.111178859 - - phosphoserine phosphatase, putative [Ricinus communis]
11 Hb_002301_280 0.1119705179 transcription factor TF Family: SBP hypothetical protein JCGZ_21462 [Jatropha curcas]
12 Hb_031862_180 0.1127182811 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
13 Hb_000212_240 0.1135180186 - - short-chain dehydrogenase, putative [Ricinus communis]
14 Hb_000606_090 0.1138455488 - - Far upstream element-binding protein, putative [Ricinus communis]
15 Hb_000465_430 0.1146538374 - - PREDICTED: uncharacterized protein LOC105632325 [Jatropha curcas]
16 Hb_002374_020 0.1163371095 - - PREDICTED: protein KRTCAP2 homolog [Jatropha curcas]
17 Hb_144598_030 0.1165499855 - - PREDICTED: mitotic apparatus protein p62 [Jatropha curcas]
18 Hb_000268_020 0.1168105188 - - conserved hypothetical protein [Ricinus communis]
19 Hb_137403_010 0.1171303226 - - PREDICTED: actin-related protein 9 [Jatropha curcas]
20 Hb_000606_080 0.1174776595 - - PREDICTED: RNA-binding protein Nova-2-like [Malus domestica]

Gene co-expression network

sample Hb_010381_120 Hb_010381_120 Hb_000494_040 Hb_000494_040 Hb_010381_120--Hb_000494_040 Hb_001689_020 Hb_001689_020 Hb_010381_120--Hb_001689_020 Hb_002107_160 Hb_002107_160 Hb_010381_120--Hb_002107_160 Hb_005862_010 Hb_005862_010 Hb_010381_120--Hb_005862_010 Hb_002529_060 Hb_002529_060 Hb_010381_120--Hb_002529_060 Hb_005016_170 Hb_005016_170 Hb_010381_120--Hb_005016_170 Hb_000606_090 Hb_000606_090 Hb_000494_040--Hb_000606_090 Hb_001135_060 Hb_001135_060 Hb_000494_040--Hb_001135_060 Hb_000494_040--Hb_005862_010 Hb_000373_240 Hb_000373_240 Hb_000494_040--Hb_000373_240 Hb_163950_030 Hb_163950_030 Hb_000494_040--Hb_163950_030 Hb_000010_090 Hb_000010_090 Hb_000494_040--Hb_000010_090 Hb_002671_100 Hb_002671_100 Hb_001689_020--Hb_002671_100 Hb_000424_230 Hb_000424_230 Hb_001689_020--Hb_000424_230 Hb_001689_020--Hb_005016_170 Hb_000123_090 Hb_000123_090 Hb_001689_020--Hb_000123_090 Hb_001341_120 Hb_001341_120 Hb_001689_020--Hb_001341_120 Hb_028390_010 Hb_028390_010 Hb_001689_020--Hb_028390_010 Hb_001158_220 Hb_001158_220 Hb_002107_160--Hb_001158_220 Hb_000157_030 Hb_000157_030 Hb_002107_160--Hb_000157_030 Hb_010691_060 Hb_010691_060 Hb_002107_160--Hb_010691_060 Hb_002495_040 Hb_002495_040 Hb_002107_160--Hb_002495_040 Hb_000120_500 Hb_000120_500 Hb_002107_160--Hb_000120_500 Hb_000465_430 Hb_000465_430 Hb_002107_160--Hb_000465_430 Hb_004934_070 Hb_004934_070 Hb_005862_010--Hb_004934_070 Hb_144598_030 Hb_144598_030 Hb_005862_010--Hb_144598_030 Hb_004072_020 Hb_004072_020 Hb_005862_010--Hb_004072_020 Hb_003912_090 Hb_003912_090 Hb_005862_010--Hb_003912_090 Hb_137403_010 Hb_137403_010 Hb_005862_010--Hb_137403_010 Hb_006816_390 Hb_006816_390 Hb_002529_060--Hb_006816_390 Hb_000645_050 Hb_000645_050 Hb_002529_060--Hb_000645_050 Hb_002529_060--Hb_000465_430 Hb_002529_060--Hb_002495_040 Hb_003502_080 Hb_003502_080 Hb_002529_060--Hb_003502_080 Hb_000322_100 Hb_000322_100 Hb_002529_060--Hb_000322_100 Hb_005016_170--Hb_001158_220 Hb_005016_170--Hb_000465_430 Hb_005016_170--Hb_003502_080 Hb_005016_170--Hb_002671_100 Hb_000956_030 Hb_000956_030 Hb_005016_170--Hb_000956_030 Hb_005016_170--Hb_010691_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.1489 3.06858 5.79405 7.95389 11.9129 20.3651
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.8626 6.37097 5.21936 3.66316 5.33523

CAGE analysis