Hb_010402_020

Information

Type -
Description -
Location Contig10402: 7115-13006
Sequence    

Annotation

kegg
ID egr:104417027
description uncharacterized LOC104417027
nr
ID XP_010026656.1
description PREDICTED: uncharacterized protein LOC104417027 [Eucalyptus grandis]
swissprot
ID P14381
description Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1
trembl
ID S8DKM9
description Uncharacterized protein OS=Genlisea aurea GN=M569_11401 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010402_020 0.0 - - PREDICTED: uncharacterized protein LOC104417027 [Eucalyptus grandis]
2 Hb_000895_040 0.1392972381 - - -
3 Hb_040506_010 0.2141240079 - - protein binding protein, putative [Ricinus communis]
4 Hb_000186_100 0.2322469035 - - PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas]
5 Hb_001195_110 0.2457574773 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
6 Hb_002388_060 0.2477579572 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000009_640 0.2513323618 transcription factor TF Family: C2C2-Dof hypothetical protein JCGZ_12318 [Jatropha curcas]
8 Hb_007382_040 0.2521094953 - - uncharacterized LOC105644857 [Jatropha curcas]
9 Hb_001259_030 0.2541600354 - - PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]
10 Hb_000613_020 0.2568916325 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
11 Hb_003050_090 0.2576495707 - - lupus la ribonucleoprotein, putative [Ricinus communis]
12 Hb_007545_210 0.2577124897 transcription factor TF Family: C2C2-Dof PREDICTED: cyclic dof factor 3-like [Jatropha curcas]
13 Hb_000707_080 0.2583115036 - - hypothetical protein AALP_AA4G156500, partial [Arabis alpina]
14 Hb_000416_100 0.2613623743 - - PREDICTED: uncharacterized protein LOC105649721 [Jatropha curcas]
15 Hb_017111_010 0.2615770025 - - PREDICTED: inositol transporter 4 [Jatropha curcas]
16 Hb_002609_100 0.2626236364 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
17 Hb_005470_010 0.2636823289 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
18 Hb_030414_050 0.2642787707 - - -
19 Hb_003687_200 0.2646667934 - - PREDICTED: uncharacterized protein LOC105632139 [Jatropha curcas]
20 Hb_000270_400 0.2652636703 - - lipase, putative [Ricinus communis]

Gene co-expression network

sample Hb_010402_020 Hb_010402_020 Hb_000895_040 Hb_000895_040 Hb_010402_020--Hb_000895_040 Hb_040506_010 Hb_040506_010 Hb_010402_020--Hb_040506_010 Hb_000186_100 Hb_000186_100 Hb_010402_020--Hb_000186_100 Hb_001195_110 Hb_001195_110 Hb_010402_020--Hb_001195_110 Hb_002388_060 Hb_002388_060 Hb_010402_020--Hb_002388_060 Hb_000009_640 Hb_000009_640 Hb_010402_020--Hb_000009_640 Hb_005470_010 Hb_005470_010 Hb_000895_040--Hb_005470_010 Hb_000895_040--Hb_040506_010 Hb_000523_020 Hb_000523_020 Hb_000895_040--Hb_000523_020 Hb_000270_400 Hb_000270_400 Hb_000895_040--Hb_000270_400 Hb_000895_040--Hb_001195_110 Hb_040506_010--Hb_000186_100 Hb_040506_010--Hb_005470_010 Hb_007382_040 Hb_007382_040 Hb_040506_010--Hb_007382_040 Hb_000733_040 Hb_000733_040 Hb_040506_010--Hb_000733_040 Hb_004307_040 Hb_004307_040 Hb_040506_010--Hb_004307_040 Hb_017111_010 Hb_017111_010 Hb_000186_100--Hb_017111_010 Hb_000186_100--Hb_002388_060 Hb_007545_210 Hb_007545_210 Hb_000186_100--Hb_007545_210 Hb_003687_200 Hb_003687_200 Hb_000186_100--Hb_003687_200 Hb_032264_130 Hb_032264_130 Hb_000186_100--Hb_032264_130 Hb_012807_120 Hb_012807_120 Hb_001195_110--Hb_012807_120 Hb_002025_230 Hb_002025_230 Hb_001195_110--Hb_002025_230 Hb_000365_350 Hb_000365_350 Hb_001195_110--Hb_000365_350 Hb_011316_030 Hb_011316_030 Hb_001195_110--Hb_011316_030 Hb_001140_080 Hb_001140_080 Hb_001195_110--Hb_001140_080 Hb_000138_010 Hb_000138_010 Hb_001195_110--Hb_000138_010 Hb_002388_060--Hb_007545_210 Hb_002388_060--Hb_000523_020 Hb_000416_100 Hb_000416_100 Hb_002388_060--Hb_000416_100 Hb_002388_060--Hb_000270_400 Hb_002388_060--Hb_032264_130 Hb_001454_390 Hb_001454_390 Hb_002388_060--Hb_001454_390 Hb_004254_040 Hb_004254_040 Hb_000009_640--Hb_004254_040 Hb_004232_010 Hb_004232_010 Hb_000009_640--Hb_004232_010 Hb_000172_610 Hb_000172_610 Hb_000009_640--Hb_000172_610 Hb_001259_030 Hb_001259_030 Hb_000009_640--Hb_001259_030 Hb_002078_430 Hb_002078_430 Hb_000009_640--Hb_002078_430 Hb_000009_640--Hb_001140_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.208118 0.0397354 0.00510423 0.00516154 0.0603114 0.0550117
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0625522 0 0.0470221 0 0

CAGE analysis