Hb_010407_120

Information

Type -
Description -
Location Contig10407: 133397-134373
Sequence    

Annotation

kegg
ID pop:POPTR_0010s08170g
description hypothetical protein
nr
ID XP_012069839.1
description PREDICTED: glutathione transferase GST 23-like [Jatropha curcas]
swissprot
ID Q9FQA3
description Glutathione transferase GST 23 OS=Zea mays PE=2 SV=1
trembl
ID A0A067KVW3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02334 PE=3 SV=1
Gene Ontology
ID GO:0004364
description probable glutathione s-transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01518: 133359-134207
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010407_120 0.0 - - PREDICTED: glutathione transferase GST 23-like [Jatropha curcas]
2 Hb_001544_040 0.0696849848 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
3 Hb_007532_050 0.0840917278 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
4 Hb_000933_200 0.087791062 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
5 Hb_007527_020 0.0879002135 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
6 Hb_003253_020 0.0920876783 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
7 Hb_000438_190 0.0955864848 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
8 Hb_148914_010 0.0987382844 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_002232_370 0.100596648 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
10 Hb_000513_110 0.1011168217 - - PREDICTED: germin-like protein subfamily 1 member 13 [Populus euphratica]
11 Hb_002805_230 0.1030934482 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
12 Hb_002965_020 0.1033082824 - - hypothetical protein JCGZ_18947 [Jatropha curcas]
13 Hb_000076_200 0.1044754049 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000617_340 0.1054109025 - - respiratory burst oxidase B [Manihot esculenta]
15 Hb_001134_040 0.1108841044 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
16 Hb_003090_070 0.1120325895 - - PREDICTED: laccase-7 [Jatropha curcas]
17 Hb_001901_090 0.1137437982 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_000245_140 0.1139745234 - - PREDICTED: CASP-like protein 3A1 [Jatropha curcas]
19 Hb_000120_710 0.1148783779 - - unnamed protein product [Vitis vinifera]
20 Hb_000503_040 0.1150550523 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]

Gene co-expression network

sample Hb_010407_120 Hb_010407_120 Hb_001544_040 Hb_001544_040 Hb_010407_120--Hb_001544_040 Hb_007532_050 Hb_007532_050 Hb_010407_120--Hb_007532_050 Hb_000933_200 Hb_000933_200 Hb_010407_120--Hb_000933_200 Hb_007527_020 Hb_007527_020 Hb_010407_120--Hb_007527_020 Hb_003253_020 Hb_003253_020 Hb_010407_120--Hb_003253_020 Hb_000438_190 Hb_000438_190 Hb_010407_120--Hb_000438_190 Hb_000120_710 Hb_000120_710 Hb_001544_040--Hb_000120_710 Hb_001544_040--Hb_003253_020 Hb_000617_340 Hb_000617_340 Hb_001544_040--Hb_000617_340 Hb_000513_110 Hb_000513_110 Hb_001544_040--Hb_000513_110 Hb_005356_010 Hb_005356_010 Hb_001544_040--Hb_005356_010 Hb_002805_230 Hb_002805_230 Hb_007532_050--Hb_002805_230 Hb_003090_070 Hb_003090_070 Hb_007532_050--Hb_003090_070 Hb_000059_100 Hb_000059_100 Hb_007532_050--Hb_000059_100 Hb_000318_440 Hb_000318_440 Hb_007532_050--Hb_000318_440 Hb_000076_200 Hb_000076_200 Hb_007532_050--Hb_000076_200 Hb_007532_050--Hb_007527_020 Hb_000933_200--Hb_003253_020 Hb_000933_200--Hb_000617_340 Hb_000933_200--Hb_000513_110 Hb_000933_200--Hb_001544_040 Hb_003786_060 Hb_003786_060 Hb_000933_200--Hb_003786_060 Hb_007527_020--Hb_005356_010 Hb_007527_020--Hb_002805_230 Hb_000281_200 Hb_000281_200 Hb_007527_020--Hb_000281_200 Hb_007527_020--Hb_000513_110 Hb_007527_020--Hb_001544_040 Hb_001901_090 Hb_001901_090 Hb_003253_020--Hb_001901_090 Hb_003253_020--Hb_000617_340 Hb_003253_020--Hb_000513_110 Hb_003253_020--Hb_000120_710 Hb_004544_070 Hb_004544_070 Hb_000438_190--Hb_004544_070 Hb_148914_010 Hb_148914_010 Hb_000438_190--Hb_148914_010 Hb_002232_370 Hb_002232_370 Hb_000438_190--Hb_002232_370 Hb_002749_070 Hb_002749_070 Hb_000438_190--Hb_002749_070 Hb_011145_020 Hb_011145_020 Hb_000438_190--Hb_011145_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.04958 4.40762 6.60187 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 79.7155 1.24034

CAGE analysis