Hb_010407_190

Information

Type -
Description -
Location Contig10407: 200631-202175
Sequence    

Annotation

kegg
ID rcu:RCOM_1006960
description inorganic phosphate transporter, putative
nr
ID AIY53218.1
description phosphate transporter [Manihot esculenta]
swissprot
ID Q494P0
description Probable inorganic phosphate transporter 1-7 OS=Arabidopsis thaliana GN=PHT1-7 PE=2 SV=2
trembl
ID A0A0A1G398
description Phosphate transporter OS=Manihot esculenta GN=PT1;11 PE=2 SV=1
Gene Ontology
ID GO:0016021
description inorganic phosphate transporter 1-4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01529: 200497-203173
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010407_190 0.0 - - phosphate transporter [Manihot esculenta]
2 Hb_007257_010 0.1451980212 - - cytosolic class II low molecular weight heat shock protein [Prunus dulcis]
3 Hb_000062_110 0.1656340548 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
4 Hb_001766_040 0.1711046642 - - chaperone clpb, putative [Ricinus communis]
5 Hb_000329_100 0.1890312452 - - PREDICTED: uncharacterized protein LOC105643144 [Jatropha curcas]
6 Hb_000031_170 0.1904278784 - - PREDICTED: abnormal long morphology protein 1 isoform X1 [Jatropha curcas]
7 Hb_000011_210 0.1928651961 - - PREDICTED: FACT complex subunit SPT16-like [Jatropha curcas]
8 Hb_006573_010 0.1950110266 - - heat shock protein [Hevea brasiliensis]
9 Hb_007575_080 0.1978141178 - - PREDICTED: lysine-specific histone demethylase 1 homolog 3 [Jatropha curcas]
10 Hb_017966_020 0.1985225482 - - PREDICTED: pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Jatropha curcas]
11 Hb_000197_290 0.2002408373 - - PREDICTED: A-agglutinin anchorage subunit [Jatropha curcas]
12 Hb_000206_120 0.201083544 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
13 Hb_002233_100 0.2056520929 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 6-like [Malus domestica]
14 Hb_011344_020 0.206184896 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
15 Hb_000300_120 0.2065137786 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
16 Hb_000069_320 0.2070669695 - - PREDICTED: uncharacterized protein LOC105642846 [Jatropha curcas]
17 Hb_011947_050 0.2072165209 - - E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
18 Hb_000080_170 0.2072867657 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
19 Hb_001488_270 0.2075537732 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
20 Hb_003994_100 0.2077397963 transcription factor TF Family: PHD PREDICTED: histone acetyltransferase HAC1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_010407_190 Hb_010407_190 Hb_007257_010 Hb_007257_010 Hb_010407_190--Hb_007257_010 Hb_000062_110 Hb_000062_110 Hb_010407_190--Hb_000062_110 Hb_001766_040 Hb_001766_040 Hb_010407_190--Hb_001766_040 Hb_000329_100 Hb_000329_100 Hb_010407_190--Hb_000329_100 Hb_000031_170 Hb_000031_170 Hb_010407_190--Hb_000031_170 Hb_000011_210 Hb_000011_210 Hb_010407_190--Hb_000011_210 Hb_006573_010 Hb_006573_010 Hb_007257_010--Hb_006573_010 Hb_027380_230 Hb_027380_230 Hb_007257_010--Hb_027380_230 Hb_020247_050 Hb_020247_050 Hb_007257_010--Hb_020247_050 Hb_008147_050 Hb_008147_050 Hb_007257_010--Hb_008147_050 Hb_007257_010--Hb_001766_040 Hb_000062_110--Hb_001766_040 Hb_000941_140 Hb_000941_140 Hb_000062_110--Hb_000941_140 Hb_006618_040 Hb_006618_040 Hb_000062_110--Hb_006618_040 Hb_001369_370 Hb_001369_370 Hb_000062_110--Hb_001369_370 Hb_011344_020 Hb_011344_020 Hb_000062_110--Hb_011344_020 Hb_019516_030 Hb_019516_030 Hb_000062_110--Hb_019516_030 Hb_001366_160 Hb_001366_160 Hb_001766_040--Hb_001366_160 Hb_001766_040--Hb_006573_010 Hb_005962_010 Hb_005962_010 Hb_001766_040--Hb_005962_010 Hb_002368_070 Hb_002368_070 Hb_001766_040--Hb_002368_070 Hb_010180_060 Hb_010180_060 Hb_000329_100--Hb_010180_060 Hb_024185_010 Hb_024185_010 Hb_000329_100--Hb_024185_010 Hb_007575_080 Hb_007575_080 Hb_000329_100--Hb_007575_080 Hb_000005_070 Hb_000005_070 Hb_000329_100--Hb_000005_070 Hb_005488_170 Hb_005488_170 Hb_000329_100--Hb_005488_170 Hb_003805_050 Hb_003805_050 Hb_000329_100--Hb_003805_050 Hb_007416_160 Hb_007416_160 Hb_000031_170--Hb_007416_160 Hb_005486_030 Hb_005486_030 Hb_000031_170--Hb_005486_030 Hb_001205_230 Hb_001205_230 Hb_000031_170--Hb_001205_230 Hb_000046_190 Hb_000046_190 Hb_000031_170--Hb_000046_190 Hb_000574_400 Hb_000574_400 Hb_000031_170--Hb_000574_400 Hb_000318_390 Hb_000318_390 Hb_000031_170--Hb_000318_390 Hb_001417_050 Hb_001417_050 Hb_000011_210--Hb_001417_050 Hb_000935_090 Hb_000935_090 Hb_000011_210--Hb_000935_090 Hb_015475_020 Hb_015475_020 Hb_000011_210--Hb_015475_020 Hb_133047_010 Hb_133047_010 Hb_000011_210--Hb_133047_010 Hb_010315_090 Hb_010315_090 Hb_000011_210--Hb_010315_090 Hb_000025_650 Hb_000025_650 Hb_000011_210--Hb_000025_650
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.72158 10.0624 0.689975 3.54477 8.77541 6.96665
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.87156 1.66242 2.09944 1.26028 10.9437

CAGE analysis