Hb_010417_120

Information

Type -
Description -
Location Contig10417: 88300-88965
Sequence    

Annotation

kegg
ID rcu:RCOM_1689330
description hypothetical protein
nr
ID XP_002509874.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RCJ0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1689330 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010417_120 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_004242_160 0.0750569622 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
3 Hb_002922_010 0.0858582535 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
4 Hb_073870_020 0.0980155618 - - PREDICTED: probable receptor-like protein kinase At1g67000, partial [Jatropha curcas]
5 Hb_027214_060 0.0981662981 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
6 Hb_000347_360 0.0983646313 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
7 Hb_025477_020 0.1012651753 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
8 Hb_025477_030 0.1053633522 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
9 Hb_001477_080 0.1056221652 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
10 Hb_002475_110 0.1062849454 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
11 Hb_094839_010 0.1069585274 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000227_410 0.109608146 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
13 Hb_000260_130 0.1190848564 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
14 Hb_000904_090 0.1191953215 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
15 Hb_001511_270 0.1193405348 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
16 Hb_000313_190 0.1211053354 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
17 Hb_001168_100 0.1219991235 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
18 Hb_007383_050 0.1228672711 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
19 Hb_116349_090 0.1245824762 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
20 Hb_000134_010 0.1249550099 - - -

Gene co-expression network

sample Hb_010417_120 Hb_010417_120 Hb_004242_160 Hb_004242_160 Hb_010417_120--Hb_004242_160 Hb_002922_010 Hb_002922_010 Hb_010417_120--Hb_002922_010 Hb_073870_020 Hb_073870_020 Hb_010417_120--Hb_073870_020 Hb_027214_060 Hb_027214_060 Hb_010417_120--Hb_027214_060 Hb_000347_360 Hb_000347_360 Hb_010417_120--Hb_000347_360 Hb_025477_020 Hb_025477_020 Hb_010417_120--Hb_025477_020 Hb_001477_080 Hb_001477_080 Hb_004242_160--Hb_001477_080 Hb_001511_270 Hb_001511_270 Hb_004242_160--Hb_001511_270 Hb_001098_020 Hb_001098_020 Hb_004242_160--Hb_001098_020 Hb_000529_050 Hb_000529_050 Hb_004242_160--Hb_000529_050 Hb_000313_190 Hb_000313_190 Hb_004242_160--Hb_000313_190 Hb_002922_010--Hb_025477_020 Hb_002922_010--Hb_001477_080 Hb_041534_010 Hb_041534_010 Hb_002922_010--Hb_041534_010 Hb_125201_010 Hb_125201_010 Hb_002922_010--Hb_125201_010 Hb_003582_020 Hb_003582_020 Hb_002922_010--Hb_003582_020 Hb_073870_020--Hb_000347_360 Hb_002849_030 Hb_002849_030 Hb_073870_020--Hb_002849_030 Hb_073870_020--Hb_027214_060 Hb_009189_010 Hb_009189_010 Hb_073870_020--Hb_009189_010 Hb_000227_410 Hb_000227_410 Hb_073870_020--Hb_000227_410 Hb_048538_010 Hb_048538_010 Hb_073870_020--Hb_048538_010 Hb_027214_060--Hb_000227_410 Hb_002475_110 Hb_002475_110 Hb_027214_060--Hb_002475_110 Hb_147137_020 Hb_147137_020 Hb_027214_060--Hb_147137_020 Hb_000904_090 Hb_000904_090 Hb_027214_060--Hb_000904_090 Hb_027214_060--Hb_000347_360 Hb_000347_360--Hb_048538_010 Hb_000347_360--Hb_000227_410 Hb_000347_360--Hb_002849_030 Hb_000322_020 Hb_000322_020 Hb_000347_360--Hb_000322_020 Hb_000210_150 Hb_000210_150 Hb_025477_020--Hb_000210_150 Hb_025477_020--Hb_003582_020 Hb_009707_010 Hb_009707_010 Hb_025477_020--Hb_009707_010 Hb_001289_030 Hb_001289_030 Hb_025477_020--Hb_001289_030 Hb_025477_020--Hb_001477_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 90.981 9.40905 23.0882 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.433851 0.136415 0 1.27951 2.41266

CAGE analysis