Hb_010423_030

Information

Type -
Description -
Location Contig10423: 35511-57950
Sequence    

Annotation

kegg
ID rcu:RCOM_1573120
description transcription factor, putative
nr
ID XP_012086614.1
description PREDICTED: uncharacterized protein LOC105645584 [Jatropha curcas]
swissprot
ID Q8C0I4
description Enhancer of polycomb homolog 2 OS=Mus musculus GN=Epc2 PE=2 SV=2
trembl
ID A0A067L8B0
description Enhancer of polycomb-like protein OS=Jatropha curcas GN=JCGZ_01191 PE=3 SV=1
Gene Ontology
ID GO:0032777
description enhancer of polycomb-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01555: 35589-57988
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010423_030 0.0 - - PREDICTED: uncharacterized protein LOC105645584 [Jatropha curcas]
2 Hb_001470_030 0.0651330797 - - PREDICTED: MORC family CW-type zinc finger protein 3 isoform X2 [Jatropha curcas]
3 Hb_001030_020 0.0674930162 - - Poly(A) polymerase alpha, putative [Ricinus communis]
4 Hb_001278_100 0.0678954229 - - PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas]
5 Hb_001123_060 0.0688331437 - - PREDICTED: ALBINO3-like protein 2, chloroplastic [Jatropha curcas]
6 Hb_089032_030 0.0689128323 - - PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Jatropha curcas]
7 Hb_012022_040 0.0715115467 - - Protein SIS1, putative [Ricinus communis]
8 Hb_000078_120 0.0730526745 - - PREDICTED: BRCA1-associated protein [Jatropha curcas]
9 Hb_000948_160 0.0736408928 - - PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Jatropha curcas]
10 Hb_002078_350 0.0740663263 - - hypothetical protein B456_005G166600 [Gossypium raimondii]
11 Hb_008494_100 0.0782080017 - - PREDICTED: protein RMD5 homolog A-like [Jatropha curcas]
12 Hb_007676_080 0.078388584 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 14-like [Jatropha curcas]
13 Hb_000003_230 0.0795424127 - - PREDICTED: FAD synthetase 2, chloroplastic [Jatropha curcas]
14 Hb_000856_010 0.0803972045 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
15 Hb_000136_260 0.0820980799 - - 40S ribosomal protein S5A [Hevea brasiliensis]
16 Hb_011386_010 0.0826758564 - - mitochondrial carrier protein, putative [Ricinus communis]
17 Hb_001545_170 0.0831580829 - - PREDICTED: cleavage stimulating factor 64 isoform X1 [Jatropha curcas]
18 Hb_000340_180 0.0844031906 - - PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1 [Jatropha curcas]
19 Hb_003151_040 0.0845230156 transcription factor TF Family: Alfin-like zinc finger family protein [Populus trichocarpa]
20 Hb_000373_070 0.0848739762 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_010423_030 Hb_010423_030 Hb_001470_030 Hb_001470_030 Hb_010423_030--Hb_001470_030 Hb_001030_020 Hb_001030_020 Hb_010423_030--Hb_001030_020 Hb_001278_100 Hb_001278_100 Hb_010423_030--Hb_001278_100 Hb_001123_060 Hb_001123_060 Hb_010423_030--Hb_001123_060 Hb_089032_030 Hb_089032_030 Hb_010423_030--Hb_089032_030 Hb_012022_040 Hb_012022_040 Hb_010423_030--Hb_012022_040 Hb_001470_030--Hb_001030_020 Hb_002078_350 Hb_002078_350 Hb_001470_030--Hb_002078_350 Hb_003938_090 Hb_003938_090 Hb_001470_030--Hb_003938_090 Hb_000152_500 Hb_000152_500 Hb_001470_030--Hb_000152_500 Hb_000373_070 Hb_000373_070 Hb_001470_030--Hb_000373_070 Hb_027380_050 Hb_027380_050 Hb_001030_020--Hb_027380_050 Hb_001245_100 Hb_001245_100 Hb_001030_020--Hb_001245_100 Hb_001163_050 Hb_001163_050 Hb_001030_020--Hb_001163_050 Hb_001157_040 Hb_001157_040 Hb_001030_020--Hb_001157_040 Hb_001278_100--Hb_012022_040 Hb_000032_380 Hb_000032_380 Hb_001278_100--Hb_000032_380 Hb_000270_310 Hb_000270_310 Hb_001278_100--Hb_000270_310 Hb_003582_060 Hb_003582_060 Hb_001278_100--Hb_003582_060 Hb_000390_300 Hb_000390_300 Hb_001278_100--Hb_000390_300 Hb_164010_040 Hb_164010_040 Hb_001278_100--Hb_164010_040 Hb_000329_340 Hb_000329_340 Hb_001123_060--Hb_000329_340 Hb_001123_060--Hb_001278_100 Hb_001123_060--Hb_000032_380 Hb_003389_040 Hb_003389_040 Hb_001123_060--Hb_003389_040 Hb_001123_060--Hb_001030_020 Hb_010812_120 Hb_010812_120 Hb_089032_030--Hb_010812_120 Hb_003502_060 Hb_003502_060 Hb_089032_030--Hb_003502_060 Hb_003349_090 Hb_003349_090 Hb_089032_030--Hb_003349_090 Hb_009615_070 Hb_009615_070 Hb_089032_030--Hb_009615_070 Hb_001545_170 Hb_001545_170 Hb_089032_030--Hb_001545_170 Hb_000856_010 Hb_000856_010 Hb_012022_040--Hb_000856_010 Hb_004109_220 Hb_004109_220 Hb_012022_040--Hb_004109_220 Hb_149985_010 Hb_149985_010 Hb_012022_040--Hb_149985_010 Hb_000221_190 Hb_000221_190 Hb_012022_040--Hb_000221_190 Hb_000928_070 Hb_000928_070 Hb_012022_040--Hb_000928_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.32404 5.12497 3.96879 5.92362 3.36532 5.41316
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.31917 10.5042 5.38442 5.9177 5.03602

CAGE analysis