Hb_010519_030

Information

Type -
Description -
Location Contig10519: 52472-53220
Sequence    

Annotation

kegg
ID fve:101300097
description cell wall / vacuolar inhibitor of fructosidase 2-like
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010519_030 0.0 - - -
2 Hb_003777_360 0.2576261855 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
3 Hb_000223_180 0.2709522889 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
4 Hb_001638_070 0.2731060874 transcription factor TF Family: bHLH Basic helix-loop-helix DNA-binding family protein [Theobroma cacao]
5 Hb_004324_160 0.2791450565 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
6 Hb_001951_250 0.281241152 - - -
7 Hb_000130_230 0.2822864652 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098-like [Jatropha curcas]
8 Hb_002259_190 0.2859124529 - - Omega-3 fatty acid desaturase, endoplasmic reticulum, putative [Ricinus communis]
9 Hb_054865_070 0.2933527332 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
10 Hb_009974_020 0.302739899 - - PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
11 Hb_000321_130 0.3152731582 - - Alcohol dehydrogenase, putative [Ricinus communis]
12 Hb_009680_040 0.315424241 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_000117_100 0.3270191857 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000892_070 0.3285674134 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]
15 Hb_001214_080 0.3310830704 - - PREDICTED: transcription factor HBP-1b(c38)-like [Jatropha curcas]
16 Hb_002382_030 0.3358023098 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like isoform X2 [Malus domestica]
17 Hb_001369_600 0.3409841169 - - kinase, putative [Ricinus communis]
18 Hb_003020_170 0.3518116225 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
19 Hb_012338_020 0.3532486856 - - -
20 Hb_000388_030 0.3535783966 - - hypothetical protein JCGZ_13427 [Jatropha curcas]

Gene co-expression network

sample Hb_010519_030 Hb_010519_030 Hb_003777_360 Hb_003777_360 Hb_010519_030--Hb_003777_360 Hb_000223_180 Hb_000223_180 Hb_010519_030--Hb_000223_180 Hb_001638_070 Hb_001638_070 Hb_010519_030--Hb_001638_070 Hb_004324_160 Hb_004324_160 Hb_010519_030--Hb_004324_160 Hb_001951_250 Hb_001951_250 Hb_010519_030--Hb_001951_250 Hb_000130_230 Hb_000130_230 Hb_010519_030--Hb_000130_230 Hb_000117_100 Hb_000117_100 Hb_003777_360--Hb_000117_100 Hb_009974_020 Hb_009974_020 Hb_003777_360--Hb_009974_020 Hb_000836_490 Hb_000836_490 Hb_003777_360--Hb_000836_490 Hb_028271_020 Hb_028271_020 Hb_003777_360--Hb_028271_020 Hb_003777_360--Hb_000130_230 Hb_001488_370 Hb_001488_370 Hb_003777_360--Hb_001488_370 Hb_000223_180--Hb_003777_360 Hb_011016_010 Hb_011016_010 Hb_000223_180--Hb_011016_010 Hb_001079_020 Hb_001079_020 Hb_000223_180--Hb_001079_020 Hb_003106_120 Hb_003106_120 Hb_000223_180--Hb_003106_120 Hb_000223_180--Hb_000130_230 Hb_009680_040 Hb_009680_040 Hb_001638_070--Hb_009680_040 Hb_000997_190 Hb_000997_190 Hb_001638_070--Hb_000997_190 Hb_002784_100 Hb_002784_100 Hb_001638_070--Hb_002784_100 Hb_002231_030 Hb_002231_030 Hb_001638_070--Hb_002231_030 Hb_001638_070--Hb_028271_020 Hb_001638_070--Hb_001488_370 Hb_000321_130 Hb_000321_130 Hb_004324_160--Hb_000321_130 Hb_007547_020 Hb_007547_020 Hb_004324_160--Hb_007547_020 Hb_002259_190 Hb_002259_190 Hb_004324_160--Hb_002259_190 Hb_000703_040 Hb_000703_040 Hb_004324_160--Hb_000703_040 Hb_012338_020 Hb_012338_020 Hb_004324_160--Hb_012338_020 Hb_054865_070 Hb_054865_070 Hb_004324_160--Hb_054865_070 Hb_001951_250--Hb_000130_230 Hb_000371_070 Hb_000371_070 Hb_001951_250--Hb_000371_070 Hb_001951_250--Hb_003777_360 Hb_001477_150 Hb_001477_150 Hb_001951_250--Hb_001477_150 Hb_007426_050 Hb_007426_050 Hb_001951_250--Hb_007426_050 Hb_002067_140 Hb_002067_140 Hb_001951_250--Hb_002067_140 Hb_003891_080 Hb_003891_080 Hb_000130_230--Hb_003891_080 Hb_000130_230--Hb_001477_150 Hb_001767_050 Hb_001767_050 Hb_000130_230--Hb_001767_050 Hb_000892_070 Hb_000892_070 Hb_000130_230--Hb_000892_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0627758 0.112546 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.401761 0.219586 0.056581 0

CAGE analysis