Hb_010557_020

Information

Type -
Description -
Location Contig10557: 14721-21555
Sequence    

Annotation

kegg
ID cmo:103499008
description Mlo1; MLO-like protein 1
nr
ID AIZ94062.1
description Mlo protein [Hevea brasiliensis]
swissprot
ID O49621
description MLO-like protein 1 OS=Arabidopsis thaliana GN=MLO1 PE=1 SV=1
trembl
ID A0A0A7NM61
description MLO-like protein OS=Hevea brasiliensis GN=Mlo1 PE=2 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01847: 14772-21633 , PASA_asmbl_01848: 16322-16784 , PASA_asmbl_01849: 18802-19132 , PASA_asmbl_01850: 17850-18301
cDNA
(Sanger)
(ID:Location)		 025_G18.ab1: 18697-21633

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010557_020 0.0 - - Mlo protein [Hevea brasiliensis]
2 Hb_000290_030 0.061407549 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
3 Hb_000856_200 0.0759826283 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
4 Hb_010222_040 0.0823915667 - - PREDICTED: kinesin-2 [Jatropha curcas]
5 Hb_144449_010 0.0870165919 - - Potassium transporter, putative [Ricinus communis]
6 Hb_000473_100 0.0885199665 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
7 Hb_000162_200 0.095104649 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
8 Hb_000977_030 0.1020138958 - - unnamed protein product [Vitis vinifera]
9 Hb_001369_390 0.1101678814 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
10 Hb_000932_060 0.1126000089 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002724_010 0.1142283867 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Citrus sinensis]
12 Hb_001417_060 0.1152334204 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
13 Hb_029639_030 0.1152446529 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2-like [Jatropha curcas]
14 Hb_146901_010 0.1153047208 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
15 Hb_000868_130 0.115751922 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
16 Hb_007894_080 0.116383969 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001946_200 0.1163918788 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
18 Hb_001046_030 0.1165105813 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_000160_250 0.1167011795 - - Uncharacterized protein TCM_019235 [Theobroma cacao]
20 Hb_033772_060 0.1168499101 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_010557_020 Hb_010557_020 Hb_000290_030 Hb_000290_030 Hb_010557_020--Hb_000290_030 Hb_000856_200 Hb_000856_200 Hb_010557_020--Hb_000856_200 Hb_010222_040 Hb_010222_040 Hb_010557_020--Hb_010222_040 Hb_144449_010 Hb_144449_010 Hb_010557_020--Hb_144449_010 Hb_000473_100 Hb_000473_100 Hb_010557_020--Hb_000473_100 Hb_000162_200 Hb_000162_200 Hb_010557_020--Hb_000162_200 Hb_000977_030 Hb_000977_030 Hb_000290_030--Hb_000977_030 Hb_000290_030--Hb_000856_200 Hb_002724_010 Hb_002724_010 Hb_000290_030--Hb_002724_010 Hb_000160_250 Hb_000160_250 Hb_000290_030--Hb_000160_250 Hb_000290_030--Hb_000473_100 Hb_000856_200--Hb_010222_040 Hb_000856_200--Hb_000473_100 Hb_001046_030 Hb_001046_030 Hb_000856_200--Hb_001046_030 Hb_000856_200--Hb_144449_010 Hb_010222_040--Hb_000290_030 Hb_010222_040--Hb_144449_010 Hb_001318_100 Hb_001318_100 Hb_010222_040--Hb_001318_100 Hb_000333_030 Hb_000333_030 Hb_010222_040--Hb_000333_030 Hb_144449_010--Hb_000473_100 Hb_003266_010 Hb_003266_010 Hb_144449_010--Hb_003266_010 Hb_004607_160 Hb_004607_160 Hb_144449_010--Hb_004607_160 Hb_152980_020 Hb_152980_020 Hb_144449_010--Hb_152980_020 Hb_000868_130 Hb_000868_130 Hb_000473_100--Hb_000868_130 Hb_002902_040 Hb_002902_040 Hb_000473_100--Hb_002902_040 Hb_000069_540 Hb_000069_540 Hb_000473_100--Hb_000069_540 Hb_001269_400 Hb_001269_400 Hb_000473_100--Hb_001269_400 Hb_000318_010 Hb_000318_010 Hb_000162_200--Hb_000318_010 Hb_003506_010 Hb_003506_010 Hb_000162_200--Hb_003506_010 Hb_004162_320 Hb_004162_320 Hb_000162_200--Hb_004162_320 Hb_000162_200--Hb_000977_030 Hb_005892_040 Hb_005892_040 Hb_000162_200--Hb_005892_040 Hb_007894_080 Hb_007894_080 Hb_000162_200--Hb_007894_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.155971 26.6062 59.8054 95.1686 0.238989 0.462393
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.06179 1.34255 0.282535 32.6626 77.4107

CAGE analysis