Hb_010560_050

Information

Type -
Description -
Location Contig10560: 27505-33037
Sequence    

Annotation

kegg
ID cit:102607592
description acyl-protein thioesterase 1-like
nr
ID XP_012091260.1
description PREDICTED: acyl-protein thioesterase 1-like [Jatropha curcas]
swissprot
ID P0CL94
description Acyl-protein thioesterase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNF02430 PE=3 SV=1
trembl
ID A0A067GSI6
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025550mg PE=4 SV=1
Gene Ontology
ID GO:0052689
description acyl-protein thioesterase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01862: 27550-31760 , PASA_asmbl_01865: 32416-32541 , PASA_asmbl_01866: 32640-33245
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010560_050 0.0 - - PREDICTED: acyl-protein thioesterase 1-like [Jatropha curcas]
2 Hb_002631_010 0.0794185081 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
3 Hb_000025_190 0.0822295533 - - 26S proteasome non-atpase regulatory subunit, putative [Ricinus communis]
4 Hb_000700_040 0.0830097093 - - UDP-Glycosyltransferase superfamily protein isoform 4 [Theobroma cacao]
5 Hb_003633_050 0.0921792298 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
6 Hb_001085_240 0.0932190324 - - PREDICTED: probable calcium-binding protein CML22 isoform X1 [Jatropha curcas]
7 Hb_000286_060 0.0942643365 - - PREDICTED: uncharacterized protein LOC105633357 [Jatropha curcas]
8 Hb_004429_090 0.0951678675 - - PREDICTED: ras GTPase-activating protein-binding protein 1-like isoform X1 [Jatropha curcas]
9 Hb_001369_250 0.095861472 - - PREDICTED: uncharacterized protein LOC105646469 isoform X1 [Jatropha curcas]
10 Hb_001123_160 0.0964433752 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial isoform X2 [Jatropha curcas]
11 Hb_066842_010 0.096835362 - - PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
12 Hb_011344_190 0.0974079479 - - PREDICTED: maspardin [Jatropha curcas]
13 Hb_002660_170 0.0986166386 - - PREDICTED: dystrophia myotonica WD repeat-containing protein isoform X2 [Jatropha curcas]
14 Hb_032920_070 0.1031127833 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
15 Hb_000684_520 0.1042687167 - - glutathione S-transferase L3-like [Jatropha curcas]
16 Hb_000428_060 0.1047111623 - - malate dehydrogenase, putative [Ricinus communis]
17 Hb_003126_070 0.1048875232 - - PREDICTED: 3-dehydroquinate synthase, chloroplastic [Jatropha curcas]
18 Hb_002477_290 0.1050298299 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [Jatropha curcas]
19 Hb_062537_010 0.10580494 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
20 Hb_005648_010 0.1058466968 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_010560_050 Hb_010560_050 Hb_002631_010 Hb_002631_010 Hb_010560_050--Hb_002631_010 Hb_000025_190 Hb_000025_190 Hb_010560_050--Hb_000025_190 Hb_000700_040 Hb_000700_040 Hb_010560_050--Hb_000700_040 Hb_003633_050 Hb_003633_050 Hb_010560_050--Hb_003633_050 Hb_001085_240 Hb_001085_240 Hb_010560_050--Hb_001085_240 Hb_000286_060 Hb_000286_060 Hb_010560_050--Hb_000286_060 Hb_008245_010 Hb_008245_010 Hb_002631_010--Hb_008245_010 Hb_000094_210 Hb_000094_210 Hb_002631_010--Hb_000094_210 Hb_002631_010--Hb_000700_040 Hb_002631_010--Hb_000025_190 Hb_017131_010 Hb_017131_010 Hb_002631_010--Hb_017131_010 Hb_062537_010 Hb_062537_010 Hb_000025_190--Hb_062537_010 Hb_002660_170 Hb_002660_170 Hb_000025_190--Hb_002660_170 Hb_004880_150 Hb_004880_150 Hb_000025_190--Hb_004880_150 Hb_005648_010 Hb_005648_010 Hb_000025_190--Hb_005648_010 Hb_003988_050 Hb_003988_050 Hb_000025_190--Hb_003988_050 Hb_000115_150 Hb_000115_150 Hb_000025_190--Hb_000115_150 Hb_011344_190 Hb_011344_190 Hb_000700_040--Hb_011344_190 Hb_000649_140 Hb_000649_140 Hb_000700_040--Hb_000649_140 Hb_003376_250 Hb_003376_250 Hb_000700_040--Hb_003376_250 Hb_003126_070 Hb_003126_070 Hb_000700_040--Hb_003126_070 Hb_000096_160 Hb_000096_160 Hb_003633_050--Hb_000096_160 Hb_003633_050--Hb_001085_240 Hb_005914_170 Hb_005914_170 Hb_003633_050--Hb_005914_170 Hb_003633_050--Hb_011344_190 Hb_003633_050--Hb_003376_250 Hb_019654_030 Hb_019654_030 Hb_003633_050--Hb_019654_030 Hb_001085_240--Hb_000096_160 Hb_001085_240--Hb_000094_210 Hb_000228_110 Hb_000228_110 Hb_001085_240--Hb_000228_110 Hb_002675_140 Hb_002675_140 Hb_001085_240--Hb_002675_140 Hb_001085_240--Hb_005914_170 Hb_000286_060--Hb_001085_240 Hb_001332_040 Hb_001332_040 Hb_000286_060--Hb_001332_040 Hb_000227_070 Hb_000227_070 Hb_000286_060--Hb_000227_070 Hb_000286_060--Hb_003633_050 Hb_000286_060--Hb_000096_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.37301 7.50556 14.7583 35.1557 6.89289 9.06145
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.6027 23.8904 21.0041 31.0984 19.8618

CAGE analysis