Hb_010571_010

Information

Type -
Description -
Location Contig10571: 22150-23763
Sequence    

Annotation

kegg
ID bvg:104888042
description non-symbiotic hemoglobin 2
nr
ID XP_012090358.1
description PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
swissprot
ID Q941Q2
description Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1
trembl
ID A0A067LCU3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01563 PE=3 SV=1
Gene Ontology
ID GO:0005344
description non-symbiotic hemoglobin 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010571_010 0.0 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
2 Hb_002499_020 0.0815925749 - - hevamine-A precursor, putative [Ricinus communis]
3 Hb_046191_010 0.0824119499 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_003469_030 0.0911205562 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
5 Hb_006120_010 0.1181984666 - - invertase inhibitor [Manihot esculenta]
6 Hb_007181_080 0.1234721913 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
7 Hb_005056_030 0.1260274771 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
8 Hb_000077_450 0.1323241801 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_014115_010 0.1332453215 - - UDP-glucosyltransferase, putative [Ricinus communis]
10 Hb_021418_010 0.1450417906 - - PREDICTED: probable pectate lyase 12 [Prunus mume]
11 Hb_001971_070 0.1458566487 - - unnamed protein product [Coffea canephora]
12 Hb_000928_290 0.1472452077 - - PREDICTED: uncharacterized protein LOC104602212 [Nelumbo nucifera]
13 Hb_164162_020 0.1486216313 - - PREDICTED: uncharacterized protein LOC105646964 [Jatropha curcas]
14 Hb_001195_440 0.149496874 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
15 Hb_004544_080 0.155485243 - - lectin protein kinase [Populus trichocarpa]
16 Hb_000608_080 0.1568057712 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
17 Hb_001522_050 0.1577984546 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Jatropha curcas]
18 Hb_011452_020 0.1581382765 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
19 Hb_003462_150 0.159640775 - - PREDICTED: chitinase 1-like [Eucalyptus grandis]
20 Hb_001901_010 0.1602207103 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]

Gene co-expression network

sample Hb_010571_010 Hb_010571_010 Hb_002499_020 Hb_002499_020 Hb_010571_010--Hb_002499_020 Hb_046191_010 Hb_046191_010 Hb_010571_010--Hb_046191_010 Hb_003469_030 Hb_003469_030 Hb_010571_010--Hb_003469_030 Hb_006120_010 Hb_006120_010 Hb_010571_010--Hb_006120_010 Hb_007181_080 Hb_007181_080 Hb_010571_010--Hb_007181_080 Hb_005056_030 Hb_005056_030 Hb_010571_010--Hb_005056_030 Hb_002499_020--Hb_046191_010 Hb_002499_020--Hb_006120_010 Hb_002499_020--Hb_005056_030 Hb_002499_020--Hb_003469_030 Hb_014115_010 Hb_014115_010 Hb_002499_020--Hb_014115_010 Hb_046191_010--Hb_014115_010 Hb_046191_010--Hb_003469_030 Hb_046191_010--Hb_005056_030 Hb_046191_010--Hb_006120_010 Hb_095532_010 Hb_095532_010 Hb_003469_030--Hb_095532_010 Hb_003469_030--Hb_014115_010 Hb_001522_050 Hb_001522_050 Hb_003469_030--Hb_001522_050 Hb_003058_180 Hb_003058_180 Hb_006120_010--Hb_003058_180 Hb_000230_160 Hb_000230_160 Hb_006120_010--Hb_000230_160 Hb_000077_450 Hb_000077_450 Hb_006120_010--Hb_000077_450 Hb_188923_010 Hb_188923_010 Hb_006120_010--Hb_188923_010 Hb_021418_010 Hb_021418_010 Hb_007181_080--Hb_021418_010 Hb_007181_080--Hb_002499_020 Hb_007181_080--Hb_046191_010 Hb_007181_080--Hb_006120_010 Hb_000099_020 Hb_000099_020 Hb_007181_080--Hb_000099_020 Hb_006268_010 Hb_006268_010 Hb_005056_030--Hb_006268_010 Hb_002622_020 Hb_002622_020 Hb_005056_030--Hb_002622_020 Hb_012762_070 Hb_012762_070 Hb_005056_030--Hb_012762_070 Hb_000761_030 Hb_000761_030 Hb_005056_030--Hb_000761_030 Hb_000472_030 Hb_000472_030 Hb_005056_030--Hb_000472_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0501762 0 0.170541 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.368109 0

CAGE analysis