Hb_010577_040

Information

Type -
Description -
Location Contig10577: 49184-50580
Sequence    

Annotation

kegg
ID cic:CICLE_v10005641mg
description hypothetical protein
nr
ID XP_012084325.1
description PREDICTED: uncharacterized protein LOC105643738 [Jatropha curcas]
swissprot
ID Q32KT5
description Uncharacterized protein C6orf136 homolog OS=Bos taurus PE=2 SV=1
trembl
ID A0A067K636
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19823 PE=4 SV=1
Gene Ontology
ID GO:0009507
description ac007202_7 ests gb

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01896: 49221-50319
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010577_040 0.0 - - PREDICTED: uncharacterized protein LOC105643738 [Jatropha curcas]
2 Hb_003935_080 0.0779460003 - - PREDICTED: mechanosensitive ion channel protein 2, chloroplastic [Jatropha curcas]
3 Hb_000723_290 0.0854956139 - - calcium lipid binding protein, putative [Ricinus communis]
4 Hb_005489_090 0.0878565337 - - PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Jatropha curcas]
5 Hb_001621_060 0.0921369253 - - PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic [Jatropha curcas]
6 Hb_000594_100 0.10111424 - - PREDICTED: methionine aminopeptidase 1B, chloroplastic [Jatropha curcas]
7 Hb_020378_060 0.1015005511 - - PREDICTED: methyltransferase-like protein 13 [Jatropha curcas]
8 Hb_001124_180 0.1019940016 - - PREDICTED: uncharacterized protein LOC105171432 [Sesamum indicum]
9 Hb_004109_160 0.1068778757 - - PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Jatropha curcas]
10 Hb_007632_170 0.1085970331 - - hypothetical protein JCGZ_01028 [Jatropha curcas]
11 Hb_000983_070 0.1102871483 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001792_030 0.1115182742 - - PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Jatropha curcas]
13 Hb_005725_220 0.116738793 - - PREDICTED: uncharacterized protein LOC105630808 [Jatropha curcas]
14 Hb_001789_200 0.116860703 - - PREDICTED: sec-independent protein translocase protein TATB, chloroplastic [Jatropha curcas]
15 Hb_001898_180 0.1210413767 - - PREDICTED: translation initiation factor IF-1, chloroplastic [Jatropha curcas]
16 Hb_000388_060 0.1220543201 - - fructokinase [Manihot esculenta]
17 Hb_001711_120 0.1223628864 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Jatropha curcas]
18 Hb_002078_300 0.1245726091 - - PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
19 Hb_005846_030 0.1274476597 - - PREDICTED: 50S ribosomal protein L29, chloroplastic [Jatropha curcas]
20 Hb_001373_130 0.1288865001 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_010577_040 Hb_010577_040 Hb_003935_080 Hb_003935_080 Hb_010577_040--Hb_003935_080 Hb_000723_290 Hb_000723_290 Hb_010577_040--Hb_000723_290 Hb_005489_090 Hb_005489_090 Hb_010577_040--Hb_005489_090 Hb_001621_060 Hb_001621_060 Hb_010577_040--Hb_001621_060 Hb_000594_100 Hb_000594_100 Hb_010577_040--Hb_000594_100 Hb_020378_060 Hb_020378_060 Hb_010577_040--Hb_020378_060 Hb_003935_080--Hb_005489_090 Hb_003935_080--Hb_000594_100 Hb_001124_180 Hb_001124_180 Hb_003935_080--Hb_001124_180 Hb_001792_030 Hb_001792_030 Hb_003935_080--Hb_001792_030 Hb_000866_050 Hb_000866_050 Hb_003935_080--Hb_000866_050 Hb_004109_160 Hb_004109_160 Hb_000723_290--Hb_004109_160 Hb_000167_050 Hb_000167_050 Hb_000723_290--Hb_000167_050 Hb_000365_370 Hb_000365_370 Hb_000723_290--Hb_000365_370 Hb_000723_290--Hb_001124_180 Hb_000176_010 Hb_000176_010 Hb_000723_290--Hb_000176_010 Hb_005489_090--Hb_001124_180 Hb_005489_090--Hb_000594_100 Hb_005725_220 Hb_005725_220 Hb_005489_090--Hb_005725_220 Hb_005489_090--Hb_001792_030 Hb_001621_060--Hb_001792_030 Hb_000189_520 Hb_000189_520 Hb_001621_060--Hb_000189_520 Hb_001621_060--Hb_004109_160 Hb_008698_010 Hb_008698_010 Hb_001621_060--Hb_008698_010 Hb_001621_060--Hb_003935_080 Hb_001373_130 Hb_001373_130 Hb_000594_100--Hb_001373_130 Hb_000594_100--Hb_001124_180 Hb_000983_070 Hb_000983_070 Hb_000594_100--Hb_000983_070 Hb_001898_180 Hb_001898_180 Hb_020378_060--Hb_001898_180 Hb_000388_060 Hb_000388_060 Hb_020378_060--Hb_000388_060 Hb_020378_060--Hb_000983_070 Hb_000622_290 Hb_000622_290 Hb_020378_060--Hb_000622_290 Hb_020378_060--Hb_005489_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.40437 2.61619 14.2798 15.1183 1.31823 3.82205
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.36189 17.2587 10.1188 7.94044 40.2536

CAGE analysis