Hb_010584_030

Information

Type -
Description -
Location Contig10584: 54641-57633
Sequence    

Annotation

kegg
ID rcu:RCOM_1691820
description hypothetical protein
nr
ID XP_012086734.1
description PREDICTED: abscisic acid receptor PYL8-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FGM1
description Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=1
trembl
ID A0A067JR79
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20464 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01919: 54817-57557
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010584_030 0.0 - - PREDICTED: abscisic acid receptor PYL8-like isoform X1 [Jatropha curcas]
2 Hb_002835_410 0.1031659956 - - clathrin coat assembly protein ap-1, putative [Ricinus communis]
3 Hb_001135_160 0.1060759063 - - PREDICTED: elongator complex protein 6 [Jatropha curcas]
4 Hb_004324_250 0.113757657 - - PREDICTED: protein IWS1 homolog A isoform X1 [Jatropha curcas]
5 Hb_000556_080 0.118547746 - - PREDICTED: synaptotagmin-5 [Pyrus x bretschneideri]
6 Hb_001604_010 0.1186486713 - - 14-3-3 protein, putative [Ricinus communis]
7 Hb_060809_010 0.1202429992 - - PREDICTED: uncharacterized protein LOC105163892 [Sesamum indicum]
8 Hb_007508_070 0.1221763724 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
9 Hb_010710_030 0.1235331703 transcription factor TF Family: G2-like PREDICTED: transcription factor LUX [Jatropha curcas]
10 Hb_003464_110 0.1239745383 - - 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis]
11 Hb_000061_320 0.1254299891 - - PREDICTED: uncharacterized protein LOC105640575 isoform X1 [Jatropha curcas]
12 Hb_055590_010 0.1254804638 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000115_060 0.1257702343 - - PREDICTED: uncharacterized protein LOC103341483 [Prunus mume]
14 Hb_000617_020 0.125780329 - - PREDICTED: uncharacterized protein LOC105647486 isoform X1 [Jatropha curcas]
15 Hb_010638_020 0.1277364401 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
16 Hb_182026_020 0.1283295845 - - PREDICTED: SUN domain-containing protein 3-like [Jatropha curcas]
17 Hb_002079_010 0.1283786546 - - hypothetical protein POPTR_0001s01970g [Populus trichocarpa]
18 Hb_000025_200 0.1287937772 - - PREDICTED: cell division control protein 2 homolog A isoform X1 [Jatropha curcas]
19 Hb_003125_040 0.1288371486 - - PREDICTED: uncharacterized protein LOC105640201 isoform X1 [Jatropha curcas]
20 Hb_000418_100 0.1293566558 - - PREDICTED: F-box protein SKIP19-like [Gossypium raimondii]

Gene co-expression network

sample Hb_010584_030 Hb_010584_030 Hb_002835_410 Hb_002835_410 Hb_010584_030--Hb_002835_410 Hb_001135_160 Hb_001135_160 Hb_010584_030--Hb_001135_160 Hb_004324_250 Hb_004324_250 Hb_010584_030--Hb_004324_250 Hb_000556_080 Hb_000556_080 Hb_010584_030--Hb_000556_080 Hb_001604_010 Hb_001604_010 Hb_010584_030--Hb_001604_010 Hb_060809_010 Hb_060809_010 Hb_010584_030--Hb_060809_010 Hb_182026_020 Hb_182026_020 Hb_002835_410--Hb_182026_020 Hb_022216_020 Hb_022216_020 Hb_002835_410--Hb_022216_020 Hb_000200_050 Hb_000200_050 Hb_002835_410--Hb_000200_050 Hb_001248_130 Hb_001248_130 Hb_002835_410--Hb_001248_130 Hb_000029_020 Hb_000029_020 Hb_002835_410--Hb_000029_020 Hb_000418_100 Hb_000418_100 Hb_002835_410--Hb_000418_100 Hb_001855_010 Hb_001855_010 Hb_001135_160--Hb_001855_010 Hb_000172_370 Hb_000172_370 Hb_001135_160--Hb_000172_370 Hb_001135_160--Hb_000556_080 Hb_000365_360 Hb_000365_360 Hb_001135_160--Hb_000365_360 Hb_000017_120 Hb_000017_120 Hb_001135_160--Hb_000017_120 Hb_000012_090 Hb_000012_090 Hb_001135_160--Hb_000012_090 Hb_002079_010 Hb_002079_010 Hb_004324_250--Hb_002079_010 Hb_001019_060 Hb_001019_060 Hb_004324_250--Hb_001019_060 Hb_007426_030 Hb_007426_030 Hb_004324_250--Hb_007426_030 Hb_000483_200 Hb_000483_200 Hb_004324_250--Hb_000483_200 Hb_006400_060 Hb_006400_060 Hb_004324_250--Hb_006400_060 Hb_000556_080--Hb_182026_020 Hb_001439_120 Hb_001439_120 Hb_000556_080--Hb_001439_120 Hb_011224_080 Hb_011224_080 Hb_000556_080--Hb_011224_080 Hb_010638_020 Hb_010638_020 Hb_000556_080--Hb_010638_020 Hb_012340_010 Hb_012340_010 Hb_000556_080--Hb_012340_010 Hb_007441_120 Hb_007441_120 Hb_001604_010--Hb_007441_120 Hb_015746_010 Hb_015746_010 Hb_001604_010--Hb_015746_010 Hb_028872_140 Hb_028872_140 Hb_001604_010--Hb_028872_140 Hb_001604_010--Hb_001248_130 Hb_000120_950 Hb_000120_950 Hb_001604_010--Hb_000120_950 Hb_001584_330 Hb_001584_330 Hb_001604_010--Hb_001584_330 Hb_000317_430 Hb_000317_430 Hb_060809_010--Hb_000317_430 Hb_000035_380 Hb_000035_380 Hb_060809_010--Hb_000035_380 Hb_003125_040 Hb_003125_040 Hb_060809_010--Hb_003125_040 Hb_003728_020 Hb_003728_020 Hb_060809_010--Hb_003728_020 Hb_000175_070 Hb_000175_070 Hb_060809_010--Hb_000175_070 Hb_003005_020 Hb_003005_020 Hb_060809_010--Hb_003005_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.9652 5.33667 8.37996 5.87833 44.9888 35.7025
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
40.7318 22.6629 35.0956 21.0054 6.66973

CAGE analysis