Hb_010589_100

Information

Type -
Description -
Location Contig10589: 69341-73172
Sequence    

Annotation

kegg
ID rcu:RCOM_0810450
description Thioredoxin domain-containing protein, putative
nr
ID XP_010099065.1
description Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
swissprot
ID O64628
description Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana GN=At2g18990 PE=2 SV=1
trembl
ID W9RH59
description Thioredoxin domain-containing protein 9-like protein OS=Morus notabilis GN=L484_011499 PE=4 SV=1
Gene Ontology
ID GO:0005623
description thioredoxin domain-containing protein 9 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01929: 69770-70522
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010589_100 0.0 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
2 Hb_005952_020 0.0259690163 - - -
3 Hb_005779_070 0.0301283152 - - -
4 Hb_008221_120 0.1113580342 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
5 Hb_005305_190 0.1291988475 transcription factor TF Family: NAC -
6 Hb_007140_010 0.2329961112 - - -
7 Hb_172179_010 0.2335753593 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
8 Hb_106496_010 0.2958898468 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
9 Hb_001934_020 0.3196331364 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
10 Hb_000445_240 0.3279693418 - - conserved hypothetical protein [Ricinus communis]
11 Hb_115326_010 0.3280494443 - - -
12 Hb_114146_010 0.3345541832 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
13 Hb_000976_370 0.3364249784 - - beta-glucosidase, putative [Ricinus communis]
14 Hb_120112_010 0.3383315094 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
15 Hb_008689_020 0.3399097882 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001519_070 0.3747746216 - - hypothetical protein JCGZ_09841 [Jatropha curcas]
17 Hb_006535_010 0.3836305397 - - -
18 Hb_000696_020 0.3849969567 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
19 Hb_167364_020 0.3960718342 - - -
20 Hb_000861_010 0.4030064149 - - -

Gene co-expression network

sample Hb_010589_100 Hb_010589_100 Hb_005952_020 Hb_005952_020 Hb_010589_100--Hb_005952_020 Hb_005779_070 Hb_005779_070 Hb_010589_100--Hb_005779_070 Hb_008221_120 Hb_008221_120 Hb_010589_100--Hb_008221_120 Hb_005305_190 Hb_005305_190 Hb_010589_100--Hb_005305_190 Hb_007140_010 Hb_007140_010 Hb_010589_100--Hb_007140_010 Hb_172179_010 Hb_172179_010 Hb_010589_100--Hb_172179_010 Hb_005952_020--Hb_005779_070 Hb_005952_020--Hb_008221_120 Hb_005952_020--Hb_005305_190 Hb_005952_020--Hb_007140_010 Hb_005952_020--Hb_172179_010 Hb_005779_070--Hb_008221_120 Hb_005779_070--Hb_005305_190 Hb_005779_070--Hb_007140_010 Hb_005779_070--Hb_172179_010 Hb_008221_120--Hb_005305_190 Hb_000976_370 Hb_000976_370 Hb_008221_120--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_008221_120--Hb_120112_010 Hb_000445_240 Hb_000445_240 Hb_005305_190--Hb_000445_240 Hb_005305_190--Hb_007140_010 Hb_007140_010--Hb_172179_010 Hb_114146_010 Hb_114146_010 Hb_007140_010--Hb_114146_010 Hb_172179_010--Hb_114146_010 Hb_172179_010--Hb_005305_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0546667 0 0.0192649 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0437794 0 0 0

CAGE analysis