Hb_010603_020

Information

Type -
Description -
Location Contig10603: 38776-39957
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010603_020 0.0 - - -
2 Hb_003893_170 0.2211287107 - - hypothetical protein JCGZ_26423 [Jatropha curcas]
3 Hb_000397_070 0.2254338669 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
4 Hb_004032_240 0.2261570252 - - electron transporter, putative [Ricinus communis]
5 Hb_010931_110 0.2394956516 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_002311_250 0.2411406459 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
7 Hb_164732_010 0.2434157065 - - -
8 Hb_005928_080 0.24941837 - - PREDICTED: probable galacturonosyltransferase 6 isoform X1 [Jatropha curcas]
9 Hb_011457_160 0.2525024855 - - PREDICTED: BI1-like protein [Jatropha curcas]
10 Hb_019153_040 0.2542658371 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
11 Hb_002983_020 0.2558354844 - - PREDICTED: probable disease resistance protein At5g63020 [Populus euphratica]
12 Hb_000317_080 0.2619008902 - - PREDICTED: probable galacturonosyltransferase 10 [Jatropha curcas]
13 Hb_009680_030 0.2621428267 - - PREDICTED: heat shock protein 83-like [Jatropha curcas]
14 Hb_053543_010 0.2632749461 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000331_610 0.26383258 - - hypothetical protein B456_003G108600 [Gossypium raimondii]
16 Hb_046703_010 0.2680454024 - - Leucine-rich repeat protein kinase family protein [Theobroma cacao]
17 Hb_143629_050 0.2683492256 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000987_050 0.2696373254 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
19 Hb_011344_010 0.270310843 - - PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Jatropha curcas]
20 Hb_001115_050 0.2711866902 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]

Gene co-expression network

sample Hb_010603_020 Hb_010603_020 Hb_003893_170 Hb_003893_170 Hb_010603_020--Hb_003893_170 Hb_000397_070 Hb_000397_070 Hb_010603_020--Hb_000397_070 Hb_004032_240 Hb_004032_240 Hb_010603_020--Hb_004032_240 Hb_010931_110 Hb_010931_110 Hb_010603_020--Hb_010931_110 Hb_002311_250 Hb_002311_250 Hb_010603_020--Hb_002311_250 Hb_164732_010 Hb_164732_010 Hb_010603_020--Hb_164732_010 Hb_008453_060 Hb_008453_060 Hb_003893_170--Hb_008453_060 Hb_003751_110 Hb_003751_110 Hb_003893_170--Hb_003751_110 Hb_003893_170--Hb_004032_240 Hb_001439_120 Hb_001439_120 Hb_003893_170--Hb_001439_120 Hb_000733_060 Hb_000733_060 Hb_003893_170--Hb_000733_060 Hb_008453_020 Hb_008453_020 Hb_003893_170--Hb_008453_020 Hb_000291_280 Hb_000291_280 Hb_000397_070--Hb_000291_280 Hb_012340_010 Hb_012340_010 Hb_000397_070--Hb_012340_010 Hb_000397_070--Hb_003893_170 Hb_000997_210 Hb_000997_210 Hb_000397_070--Hb_000997_210 Hb_010638_020 Hb_010638_020 Hb_000397_070--Hb_010638_020 Hb_000427_030 Hb_000427_030 Hb_000397_070--Hb_000427_030 Hb_000958_010 Hb_000958_010 Hb_004032_240--Hb_000958_010 Hb_004032_240--Hb_010931_110 Hb_004032_240--Hb_008453_020 Hb_019153_040 Hb_019153_040 Hb_004032_240--Hb_019153_040 Hb_186982_030 Hb_186982_030 Hb_004032_240--Hb_186982_030 Hb_130177_010 Hb_130177_010 Hb_010931_110--Hb_130177_010 Hb_001198_090 Hb_001198_090 Hb_010931_110--Hb_001198_090 Hb_143629_050 Hb_143629_050 Hb_010931_110--Hb_143629_050 Hb_000987_050 Hb_000987_050 Hb_010931_110--Hb_000987_050 Hb_053543_010 Hb_053543_010 Hb_010931_110--Hb_053543_010 Hb_011457_160 Hb_011457_160 Hb_002311_250--Hb_011457_160 Hb_001946_360 Hb_001946_360 Hb_002311_250--Hb_001946_360 Hb_011344_010 Hb_011344_010 Hb_002311_250--Hb_011344_010 Hb_002374_440 Hb_002374_440 Hb_002311_250--Hb_002374_440 Hb_002239_040 Hb_002239_040 Hb_002311_250--Hb_002239_040 Hb_009680_030 Hb_009680_030 Hb_002311_250--Hb_009680_030 Hb_164732_010--Hb_019153_040 Hb_000300_330 Hb_000300_330 Hb_164732_010--Hb_000300_330 Hb_000567_160 Hb_000567_160 Hb_164732_010--Hb_000567_160 Hb_002983_020 Hb_002983_020 Hb_164732_010--Hb_002983_020 Hb_164732_010--Hb_009680_030 Hb_006846_090 Hb_006846_090 Hb_164732_010--Hb_006846_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.201067 0 0.0505291 0.302336 1.92687 0.408583
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.287284 0.451353 0.568507 0.0470989 0

CAGE analysis