Hb_010615_010

Information

Type -
Description -
Location Contig10615: 903-5147
Sequence    

Annotation

kegg
ID rcu:RCOM_0770830
description Reticuline oxidase precursor, putative (EC:1.21.3.3)
nr
ID XP_012075747.1
description PREDICTED: reticuline oxidase-like protein [Jatropha curcas]
swissprot
ID Q9SVG4
description Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2
trembl
ID A0A067KIN8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09156 PE=4 SV=1
Gene Ontology
ID GO:0008762
description reticuline oxidase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010615_010 0.0 - - PREDICTED: reticuline oxidase-like protein [Jatropha curcas]
2 Hb_000103_280 0.0053229819 transcription factor TF Family: HSF Heat shock factor protein HSF30, putative [Ricinus communis]
3 Hb_001784_010 0.0055124516 - - nutrient reservoir, putative [Ricinus communis]
4 Hb_008296_010 0.0069985575 - - -
5 Hb_009230_050 0.0124028622 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
6 Hb_023675_020 0.0299510592 - - acc synthase, putative [Ricinus communis]
7 Hb_070850_010 0.0342838296 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B-like [Jatropha curcas]
8 Hb_007556_010 0.0353116245 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Populus euphratica]
9 Hb_003938_150 0.0369466629 - - hypothetical protein JCGZ_17711 [Jatropha curcas]
10 Hb_117335_020 0.0478900127 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
11 Hb_013862_010 0.0662067028 - - PREDICTED: uncharacterized protein LOC105650642 [Jatropha curcas]
12 Hb_023502_010 0.0708461105 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
13 Hb_000206_280 0.0735725572 - - Uncharacterized protein TCM_031897 [Theobroma cacao]
14 Hb_000499_050 0.0793505939 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_001693_030 0.080916848 - - PREDICTED: reticuline oxidase-like [Jatropha curcas]
16 Hb_000592_040 0.0896315479 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000426_070 0.0904807403 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
18 Hb_000994_090 0.0951383495 - - PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9 [Jatropha curcas]
19 Hb_007235_040 0.101024996 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_002851_050 0.10196347 transcription factor TF Family: MYB-related myb family transcription factor family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_010615_010 Hb_010615_010 Hb_000103_280 Hb_000103_280 Hb_010615_010--Hb_000103_280 Hb_001784_010 Hb_001784_010 Hb_010615_010--Hb_001784_010 Hb_008296_010 Hb_008296_010 Hb_010615_010--Hb_008296_010 Hb_009230_050 Hb_009230_050 Hb_010615_010--Hb_009230_050 Hb_023675_020 Hb_023675_020 Hb_010615_010--Hb_023675_020 Hb_070850_010 Hb_070850_010 Hb_010615_010--Hb_070850_010 Hb_000103_280--Hb_001784_010 Hb_000103_280--Hb_008296_010 Hb_000103_280--Hb_009230_050 Hb_000103_280--Hb_023675_020 Hb_000103_280--Hb_070850_010 Hb_001784_010--Hb_008296_010 Hb_001784_010--Hb_009230_050 Hb_001784_010--Hb_070850_010 Hb_007556_010 Hb_007556_010 Hb_001784_010--Hb_007556_010 Hb_008296_010--Hb_009230_050 Hb_008296_010--Hb_070850_010 Hb_008296_010--Hb_007556_010 Hb_009230_050--Hb_070850_010 Hb_009230_050--Hb_007556_010 Hb_117335_020 Hb_117335_020 Hb_023675_020--Hb_117335_020 Hb_023675_020--Hb_001784_010 Hb_023675_020--Hb_008296_010 Hb_023675_020--Hb_009230_050 Hb_070850_010--Hb_007556_010 Hb_003938_150 Hb_003938_150 Hb_070850_010--Hb_003938_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0789486 0 0.0209447 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis