Hb_010620_010

Information

Type -
Description -
Location Contig10620: 8144-13734
Sequence    

Annotation

kegg
ID rcu:RCOM_1573460
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID KDP25035.1
description hypothetical protein JCGZ_22570 [Jatropha curcas]
swissprot
ID Q9FKG6
description U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1
trembl
ID A0A067JYF2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22570 PE=4 SV=1
Gene Ontology
ID GO:0004715
description u-box domain-containing protein 35-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010620_010 0.0 - - hypothetical protein JCGZ_22570 [Jatropha curcas]
2 Hb_001678_020 0.1903872035 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
3 Hb_000431_020 0.2155540764 - - hypothetical protein JCGZ_06801 [Jatropha curcas]
4 Hb_001102_260 0.2184147431 - - hypothetical protein L484_019841 [Morus notabilis]
5 Hb_000101_160 0.2265287 - - PREDICTED: uncharacterized protein LOC105133607 isoform X1 [Populus euphratica]
6 Hb_008725_150 0.2451889757 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
7 Hb_006846_090 0.2469273122 - - PREDICTED: uncharacterized protein LOC105648695 [Jatropha curcas]
8 Hb_000176_170 0.248102202 - - PREDICTED: tetratricopeptide repeat protein 1 [Jatropha curcas]
9 Hb_000038_030 0.2489985248 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Glycine max]
10 Hb_005656_060 0.2510884088 - - -
11 Hb_000103_360 0.2526513616 - - -
12 Hb_000106_040 0.2554476598 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Vitis vinifera]
13 Hb_000832_200 0.2586847866 - - 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
14 Hb_004316_070 0.2599853733 - - E3 ubiquitin-protein ligase UPL5 -like protein [Gossypium arboreum]
15 Hb_000208_290 0.2605826183 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 2 isoform X2 [Jatropha curcas]
16 Hb_011218_060 0.2638317712 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
17 Hb_099864_010 0.2647517321 - - Disease resistance protein RPM1, putative [Ricinus communis]
18 Hb_183980_010 0.2654896153 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
19 Hb_029388_040 0.2660752141 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
20 Hb_000857_050 0.268224839 - - PREDICTED: protein YLS9 [Jatropha curcas]

Gene co-expression network

sample Hb_010620_010 Hb_010620_010 Hb_001678_020 Hb_001678_020 Hb_010620_010--Hb_001678_020 Hb_000431_020 Hb_000431_020 Hb_010620_010--Hb_000431_020 Hb_001102_260 Hb_001102_260 Hb_010620_010--Hb_001102_260 Hb_000101_160 Hb_000101_160 Hb_010620_010--Hb_000101_160 Hb_008725_150 Hb_008725_150 Hb_010620_010--Hb_008725_150 Hb_006846_090 Hb_006846_090 Hb_010620_010--Hb_006846_090 Hb_001678_020--Hb_000101_160 Hb_000103_360 Hb_000103_360 Hb_001678_020--Hb_000103_360 Hb_023323_010 Hb_023323_010 Hb_001678_020--Hb_023323_010 Hb_002233_090 Hb_002233_090 Hb_001678_020--Hb_002233_090 Hb_000384_040 Hb_000384_040 Hb_001678_020--Hb_000384_040 Hb_000176_170 Hb_000176_170 Hb_000431_020--Hb_000176_170 Hb_003768_040 Hb_003768_040 Hb_000431_020--Hb_003768_040 Hb_000832_200 Hb_000832_200 Hb_000431_020--Hb_000832_200 Hb_000038_030 Hb_000038_030 Hb_000431_020--Hb_000038_030 Hb_099864_010 Hb_099864_010 Hb_000431_020--Hb_099864_010 Hb_000406_040 Hb_000406_040 Hb_000431_020--Hb_000406_040 Hb_005738_010 Hb_005738_010 Hb_001102_260--Hb_005738_010 Hb_027420_050 Hb_027420_050 Hb_001102_260--Hb_027420_050 Hb_020805_010 Hb_020805_010 Hb_001102_260--Hb_020805_010 Hb_001102_260--Hb_008725_150 Hb_000264_010 Hb_000264_010 Hb_001102_260--Hb_000264_010 Hb_004316_070 Hb_004316_070 Hb_001102_260--Hb_004316_070 Hb_001506_010 Hb_001506_010 Hb_000101_160--Hb_001506_010 Hb_000857_050 Hb_000857_050 Hb_000101_160--Hb_000857_050 Hb_007603_010 Hb_007603_010 Hb_000101_160--Hb_007603_010 Hb_138600_010 Hb_138600_010 Hb_000101_160--Hb_138600_010 Hb_000101_160--Hb_002233_090 Hb_008725_150--Hb_004316_070 Hb_106321_030 Hb_106321_030 Hb_008725_150--Hb_106321_030 Hb_004137_060 Hb_004137_060 Hb_008725_150--Hb_004137_060 Hb_000832_130 Hb_000832_130 Hb_008725_150--Hb_000832_130 Hb_004767_090 Hb_004767_090 Hb_008725_150--Hb_004767_090 Hb_002239_040 Hb_002239_040 Hb_008725_150--Hb_002239_040 Hb_009680_030 Hb_009680_030 Hb_006846_090--Hb_009680_030 Hb_002983_020 Hb_002983_020 Hb_006846_090--Hb_002983_020 Hb_002311_250 Hb_002311_250 Hb_006846_090--Hb_002311_250 Hb_000317_080 Hb_000317_080 Hb_006846_090--Hb_000317_080 Hb_029388_040 Hb_029388_040 Hb_006846_090--Hb_029388_040 Hb_164732_010 Hb_164732_010 Hb_006846_090--Hb_164732_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0518378 0.0636545 0.00880615 0.0214772 0.300194 0.263982
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0212337 0.162653 0.0294652 0

CAGE analysis