Hb_010638_020

Information

Type -
Description -
Location Contig10638: 32204-53604
Sequence    

Annotation

kegg
ID rcu:RCOM_0799000
description hypothetical protein
nr
ID XP_012077342.1
description PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KD37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07712 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02021: 32111-32342 , PASA_asmbl_02022: 32896-33325
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010638_020 0.0 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
2 Hb_007575_040 0.0773430329 transcription factor TF Family: bZIP PREDICTED: transcription factor VIP1-like [Jatropha curcas]
3 Hb_182026_020 0.0785235008 - - PREDICTED: SUN domain-containing protein 3-like [Jatropha curcas]
4 Hb_001439_120 0.0842555278 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000186_240 0.0848934286 - - PREDICTED: 39S ribosomal protein L4, mitochondrial [Jatropha curcas]
6 Hb_011224_080 0.0874735443 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
7 Hb_000556_080 0.0875683607 - - PREDICTED: synaptotagmin-5 [Pyrus x bretschneideri]
8 Hb_006693_030 0.0894258248 - - PREDICTED: ribonuclease H2 subunit A [Jatropha curcas]
9 Hb_004108_050 0.0894350951 - - PREDICTED: elongation factor Tu, mitochondrial [Jatropha curcas]
10 Hb_011918_080 0.0902868407 - - PREDICTED: probable serine/threonine protein kinase IREH1 isoform X2 [Jatropha curcas]
11 Hb_098993_010 0.0952158875 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
12 Hb_012340_010 0.0954831657 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
13 Hb_002368_050 0.0960892851 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002835_410 0.0960947537 - - clathrin coat assembly protein ap-1, putative [Ricinus communis]
15 Hb_000029_030 0.0973929958 - - PREDICTED: mitochondrial fission protein ELM1 [Jatropha curcas]
16 Hb_000085_310 0.0978757833 - - hypothetical protein JCGZ_00974 [Jatropha curcas]
17 Hb_000402_200 0.0983129158 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
18 Hb_005357_150 0.0985779721 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_007426_230 0.0989735398 - - hypothetical protein CICLE_v10017932mg [Citrus clementina]
20 Hb_010863_080 0.0999421839 - - PREDICTED: membrane-anchored ubiquitin-fold protein 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_010638_020 Hb_010638_020 Hb_007575_040 Hb_007575_040 Hb_010638_020--Hb_007575_040 Hb_182026_020 Hb_182026_020 Hb_010638_020--Hb_182026_020 Hb_001439_120 Hb_001439_120 Hb_010638_020--Hb_001439_120 Hb_000186_240 Hb_000186_240 Hb_010638_020--Hb_000186_240 Hb_011224_080 Hb_011224_080 Hb_010638_020--Hb_011224_080 Hb_000556_080 Hb_000556_080 Hb_010638_020--Hb_000556_080 Hb_098993_010 Hb_098993_010 Hb_007575_040--Hb_098993_010 Hb_007575_040--Hb_000186_240 Hb_010863_080 Hb_010863_080 Hb_007575_040--Hb_010863_080 Hb_003297_030 Hb_003297_030 Hb_007575_040--Hb_003297_030 Hb_000352_110 Hb_000352_110 Hb_007575_040--Hb_000352_110 Hb_002609_110 Hb_002609_110 Hb_182026_020--Hb_002609_110 Hb_000418_100 Hb_000418_100 Hb_182026_020--Hb_000418_100 Hb_011918_080 Hb_011918_080 Hb_182026_020--Hb_011918_080 Hb_182026_020--Hb_000556_080 Hb_002686_270 Hb_002686_270 Hb_182026_020--Hb_002686_270 Hb_007919_050 Hb_007919_050 Hb_001439_120--Hb_007919_050 Hb_001439_120--Hb_000556_080 Hb_000029_030 Hb_000029_030 Hb_001439_120--Hb_000029_030 Hb_001439_120--Hb_182026_020 Hb_021068_050 Hb_021068_050 Hb_001439_120--Hb_021068_050 Hb_000200_340 Hb_000200_340 Hb_000186_240--Hb_000200_340 Hb_000592_050 Hb_000592_050 Hb_000186_240--Hb_000592_050 Hb_000179_210 Hb_000179_210 Hb_000186_240--Hb_000179_210 Hb_000110_160 Hb_000110_160 Hb_000186_240--Hb_000110_160 Hb_000186_240--Hb_010863_080 Hb_006693_030 Hb_006693_030 Hb_011224_080--Hb_006693_030 Hb_011224_080--Hb_000029_030 Hb_002368_050 Hb_002368_050 Hb_011224_080--Hb_002368_050 Hb_002659_140 Hb_002659_140 Hb_011224_080--Hb_002659_140 Hb_168918_020 Hb_168918_020 Hb_011224_080--Hb_168918_020 Hb_011224_080--Hb_000556_080 Hb_001135_160 Hb_001135_160 Hb_000556_080--Hb_001135_160 Hb_012340_010 Hb_012340_010 Hb_000556_080--Hb_012340_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.1901 7.73504 5.85256 10.5069 49.1268 32.8625
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.9898 35.8045 50.7738 11.8447 7.8414

CAGE analysis