Hb_010672_050

Information

Type -
Description -
Location Contig10672: 37771-43593
Sequence    

Annotation

kegg
ID vvi:100264061
description probable beta-1,3-galactosyltransferase 2
nr
ID XP_012070844.1
description PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X3 [Jatropha curcas]
swissprot
ID A8MRC7
description Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1
trembl
ID A0A067KSM4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00899 PE=4 SV=1
Gene Ontology
ID GO:0005794
description probable beta- -galactosyltransferase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02081: 37910-43545
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010672_050 0.0 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X3 [Jatropha curcas]
2 Hb_005333_080 0.0802642442 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003299_020 0.1104558229 - - PREDICTED: uncharacterized protein LOC105649783 [Jatropha curcas]
4 Hb_001019_160 0.1127738828 - - conserved hypothetical protein [Ricinus communis]
5 Hb_012760_090 0.1157047422 - - Aspartic proteinase-like protein 1 [Morus notabilis]
6 Hb_000735_060 0.1188208362 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
7 Hb_011174_040 0.1208154542 - - conserved hypothetical protein [Ricinus communis]
8 Hb_031385_010 0.1208908046 - - PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Jatropha curcas]
9 Hb_000834_220 0.123091148 - - PREDICTED: uncharacterized protein LOC105637705 [Jatropha curcas]
10 Hb_000731_210 0.1240375544 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008695_150 0.1309272492 - - PREDICTED: beta-1,3-galactosyltransferase 7 isoform X1 [Jatropha curcas]
12 Hb_143766_080 0.130927316 - - PREDICTED: uncharacterized protein LOC105637797 isoform X1 [Jatropha curcas]
13 Hb_001754_050 0.1315489461 - - protein arginine n-methyltransferase, putative [Ricinus communis]
14 Hb_003606_050 0.1332906526 - - PREDICTED: beta-galactosidase 10 [Jatropha curcas]
15 Hb_002027_430 0.1344500845 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
16 Hb_000116_240 0.135006208 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
17 Hb_001440_010 0.1364951656 - - PREDICTED: armadillo repeat-containing kinesin-like protein 1 [Populus euphratica]
18 Hb_003879_020 0.1376732658 - - PREDICTED: MATE efflux family protein 1-like [Jatropha curcas]
19 Hb_158092_040 0.1390186846 - - PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
20 Hb_007101_260 0.1400019164 - - altered response to gravity (arg1), plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_010672_050 Hb_010672_050 Hb_005333_080 Hb_005333_080 Hb_010672_050--Hb_005333_080 Hb_003299_020 Hb_003299_020 Hb_010672_050--Hb_003299_020 Hb_001019_160 Hb_001019_160 Hb_010672_050--Hb_001019_160 Hb_012760_090 Hb_012760_090 Hb_010672_050--Hb_012760_090 Hb_000735_060 Hb_000735_060 Hb_010672_050--Hb_000735_060 Hb_011174_040 Hb_011174_040 Hb_010672_050--Hb_011174_040 Hb_005333_080--Hb_012760_090 Hb_158092_040 Hb_158092_040 Hb_005333_080--Hb_158092_040 Hb_008695_150 Hb_008695_150 Hb_005333_080--Hb_008695_150 Hb_000116_240 Hb_000116_240 Hb_005333_080--Hb_000116_240 Hb_005333_080--Hb_001019_160 Hb_005545_020 Hb_005545_020 Hb_003299_020--Hb_005545_020 Hb_000753_110 Hb_000753_110 Hb_003299_020--Hb_000753_110 Hb_001377_530 Hb_001377_530 Hb_003299_020--Hb_001377_530 Hb_000009_420 Hb_000009_420 Hb_003299_020--Hb_000009_420 Hb_003398_040 Hb_003398_040 Hb_003299_020--Hb_003398_040 Hb_003687_040 Hb_003687_040 Hb_001019_160--Hb_003687_040 Hb_000834_220 Hb_000834_220 Hb_001019_160--Hb_000834_220 Hb_000230_360 Hb_000230_360 Hb_001019_160--Hb_000230_360 Hb_031385_010 Hb_031385_010 Hb_001019_160--Hb_031385_010 Hb_001440_010 Hb_001440_010 Hb_001019_160--Hb_001440_010 Hb_000061_310 Hb_000061_310 Hb_001019_160--Hb_000061_310 Hb_002641_160 Hb_002641_160 Hb_012760_090--Hb_002641_160 Hb_010050_020 Hb_010050_020 Hb_012760_090--Hb_010050_020 Hb_034507_060 Hb_034507_060 Hb_012760_090--Hb_034507_060 Hb_004218_130 Hb_004218_130 Hb_012760_090--Hb_004218_130 Hb_000318_170 Hb_000318_170 Hb_012760_090--Hb_000318_170 Hb_005568_020 Hb_005568_020 Hb_000735_060--Hb_005568_020 Hb_003606_050 Hb_003606_050 Hb_000735_060--Hb_003606_050 Hb_022092_110 Hb_022092_110 Hb_000735_060--Hb_022092_110 Hb_001936_180 Hb_001936_180 Hb_000735_060--Hb_001936_180 Hb_000418_170 Hb_000418_170 Hb_000735_060--Hb_000418_170 Hb_000008_200 Hb_000008_200 Hb_000735_060--Hb_000008_200 Hb_003050_360 Hb_003050_360 Hb_011174_040--Hb_003050_360 Hb_000076_030 Hb_000076_030 Hb_011174_040--Hb_000076_030 Hb_007101_260 Hb_007101_260 Hb_011174_040--Hb_007101_260 Hb_048476_140 Hb_048476_140 Hb_011174_040--Hb_048476_140 Hb_010381_040 Hb_010381_040 Hb_011174_040--Hb_010381_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.106934 1.81543 5.25456 6.49201 0.167135 0.148699
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.214058 0.53593 0.437016 3.10928 3.15048

CAGE analysis