Hb_010690_010

Information

Type -
Description -
Location Contig10690: 5276-9190
Sequence    

Annotation

kegg
ID pop:POPTR_0007s06080g
description POPTRDRAFT_802731; hypothetical protein
nr
ID XP_012075174.1
description PREDICTED: NADPH-dependent 1-acyldihydroxyacetone phosphate reductase [Jatropha curcas]
swissprot
ID Q09851
description NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ayr1 PE=3 SV=2
trembl
ID B9HFQ2
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06080g PE=3 SV=2
Gene Ontology
ID GO:0000140
description nadph-dependent 1-acyldihydroxyacetone phosphate reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02111: 4906-9127 , PASA_asmbl_02112: 4906-6361 , PASA_asmbl_02114: 6745-6866 , PASA_asmbl_02115: 7339-7693
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010690_010 0.0 - - PREDICTED: NADPH-dependent 1-acyldihydroxyacetone phosphate reductase [Jatropha curcas]
2 Hb_007259_010 0.0817734826 - - hypothetical protein CISIN_1g0073972mg, partial [Citrus sinensis]
3 Hb_004531_130 0.0907584957 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X2 [Jatropha curcas]
4 Hb_001882_080 0.0935221721 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC103324347 [Prunus mume]
5 Hb_020738_010 0.1097615854 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
6 Hb_000742_290 0.1151653069 - - Reticuline oxidase precursor, putative [Ricinus communis]
7 Hb_011574_020 0.1229869868 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
8 Hb_050898_030 0.1238110499 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000139_520 0.1291917413 - - EF-hand calcium-binding domain-containing protein 4A [Theobroma cacao]
10 Hb_059275_010 0.1318849348 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
11 Hb_000861_060 0.1320576241 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
12 Hb_001638_340 0.1337287727 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000527_050 0.1386158523 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000586_110 0.1398357877 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
15 Hb_000085_410 0.141062918 - - hypothetical protein POPTR_0011s09040g [Populus trichocarpa]
16 Hb_084812_010 0.1478608702 - - PREDICTED: putative RING-H2 finger protein ATL21B [Vitis vinifera]
17 Hb_000077_280 0.1504211833 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_007426_190 0.1535470812 - - PREDICTED: uncharacterized protein LOC103325200 [Prunus mume]
19 Hb_001025_130 0.1539198759 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
20 Hb_000022_080 0.1542397934 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]

Gene co-expression network

sample Hb_010690_010 Hb_010690_010 Hb_007259_010 Hb_007259_010 Hb_010690_010--Hb_007259_010 Hb_004531_130 Hb_004531_130 Hb_010690_010--Hb_004531_130 Hb_001882_080 Hb_001882_080 Hb_010690_010--Hb_001882_080 Hb_020738_010 Hb_020738_010 Hb_010690_010--Hb_020738_010 Hb_000742_290 Hb_000742_290 Hb_010690_010--Hb_000742_290 Hb_011574_020 Hb_011574_020 Hb_010690_010--Hb_011574_020 Hb_007259_010--Hb_001882_080 Hb_007259_010--Hb_011574_020 Hb_007259_010--Hb_004531_130 Hb_001638_340 Hb_001638_340 Hb_007259_010--Hb_001638_340 Hb_007259_010--Hb_000742_290 Hb_004531_130--Hb_000742_290 Hb_050898_030 Hb_050898_030 Hb_004531_130--Hb_050898_030 Hb_009070_010 Hb_009070_010 Hb_004531_130--Hb_009070_010 Hb_000861_060 Hb_000861_060 Hb_004531_130--Hb_000861_060 Hb_004531_130--Hb_020738_010 Hb_001882_080--Hb_000742_290 Hb_001882_080--Hb_004531_130 Hb_001882_080--Hb_011574_020 Hb_000139_520 Hb_000139_520 Hb_001882_080--Hb_000139_520 Hb_020738_010--Hb_011574_020 Hb_059275_010 Hb_059275_010 Hb_020738_010--Hb_059275_010 Hb_001794_040 Hb_001794_040 Hb_020738_010--Hb_001794_040 Hb_020738_010--Hb_050898_030 Hb_000012_350 Hb_000012_350 Hb_020738_010--Hb_000012_350 Hb_000077_280 Hb_000077_280 Hb_020738_010--Hb_000077_280 Hb_001059_110 Hb_001059_110 Hb_000742_290--Hb_001059_110 Hb_000085_410 Hb_000085_410 Hb_000742_290--Hb_000085_410 Hb_000922_050 Hb_000922_050 Hb_000742_290--Hb_000922_050 Hb_011574_020--Hb_001638_340 Hb_011574_020--Hb_059275_010 Hb_011574_020--Hb_000012_350 Hb_008895_020 Hb_008895_020 Hb_011574_020--Hb_008895_020 Hb_011574_020--Hb_001794_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0270921 3.78278 11.7344 19.4438 0 0.21941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.791126 0.345175 4.31693

CAGE analysis