Hb_010691_010

Information

Type -
Description -
Location Contig10691: 5138-8837
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_007220718.1
description hypothetical protein PRUPE_ppa022673mg [Prunus persica]
swissprot
ID P04323
description Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010691_010 0.0 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
2 Hb_012239_050 0.1762796729 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002000_120 0.2370130324 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_002475_150 0.24924616 - - PREDICTED: importin subunit beta-3-like [Jatropha curcas]
5 Hb_012132_020 0.256326986 - - glutamine synthetase [Hevea brasiliensis]
6 Hb_004864_010 0.2613006462 - - hypothetical protein CICLE_v10003960mg, partial [Citrus clementina]
7 Hb_009615_180 0.2624588253 - - lipoic acid synthetase, putative [Ricinus communis]
8 Hb_000060_070 0.2644098814 - - hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
9 Hb_012490_020 0.2644913765 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
10 Hb_001439_020 0.2679163196 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
11 Hb_000500_050 0.2697686576 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
12 Hb_000230_170 0.2749953193 - - PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
13 Hb_002783_150 0.2777440901 - - cyclophilin [Hevea brasiliensis]
14 Hb_003540_100 0.2795351308 - - ATP-binding cassette transporter, putative [Ricinus communis]
15 Hb_004357_060 0.280130603 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
16 Hb_000856_130 0.2812122603 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_000100_110 0.2815696689 - - -
18 Hb_005743_030 0.2835878989 - - hypothetical protein, partial [Pseudomonas fluorescens]
19 Hb_000116_530 0.2868104905 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A reductase RecName: Full=3-hydroxy-3-methylglutaryl-coenzyme A reductase 3; Short=HMG-CoA reductase 3 [Hevea brasiliensis]
20 Hb_006922_070 0.2894635937 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]

Gene co-expression network

sample Hb_010691_010 Hb_010691_010 Hb_012239_050 Hb_012239_050 Hb_010691_010--Hb_012239_050 Hb_002000_120 Hb_002000_120 Hb_010691_010--Hb_002000_120 Hb_002475_150 Hb_002475_150 Hb_010691_010--Hb_002475_150 Hb_012132_020 Hb_012132_020 Hb_010691_010--Hb_012132_020 Hb_004864_010 Hb_004864_010 Hb_010691_010--Hb_004864_010 Hb_009615_180 Hb_009615_180 Hb_010691_010--Hb_009615_180 Hb_004648_110 Hb_004648_110 Hb_012239_050--Hb_004648_110 Hb_012239_050--Hb_012132_020 Hb_001098_030 Hb_001098_030 Hb_012239_050--Hb_001098_030 Hb_000679_030 Hb_000679_030 Hb_012239_050--Hb_000679_030 Hb_002603_110 Hb_002603_110 Hb_012239_050--Hb_002603_110 Hb_006916_180 Hb_006916_180 Hb_002000_120--Hb_006916_180 Hb_000094_050 Hb_000094_050 Hb_002000_120--Hb_000094_050 Hb_003645_050 Hb_003645_050 Hb_002000_120--Hb_003645_050 Hb_001210_100 Hb_001210_100 Hb_002000_120--Hb_001210_100 Hb_002217_290 Hb_002217_290 Hb_002000_120--Hb_002217_290 Hb_001811_080 Hb_001811_080 Hb_002475_150--Hb_001811_080 Hb_001373_130 Hb_001373_130 Hb_002475_150--Hb_001373_130 Hb_003906_060 Hb_003906_060 Hb_002475_150--Hb_003906_060 Hb_002475_150--Hb_009615_180 Hb_005743_030 Hb_005743_030 Hb_002475_150--Hb_005743_030 Hb_000856_130 Hb_000856_130 Hb_002475_150--Hb_000856_130 Hb_005183_040 Hb_005183_040 Hb_012132_020--Hb_005183_040 Hb_000210_040 Hb_000210_040 Hb_012132_020--Hb_000210_040 Hb_164945_020 Hb_164945_020 Hb_012132_020--Hb_164945_020 Hb_005493_010 Hb_005493_010 Hb_012132_020--Hb_005493_010 Hb_002716_110 Hb_002716_110 Hb_012132_020--Hb_002716_110 Hb_002817_050 Hb_002817_050 Hb_012132_020--Hb_002817_050 Hb_021443_050 Hb_021443_050 Hb_004864_010--Hb_021443_050 Hb_007035_010 Hb_007035_010 Hb_004864_010--Hb_007035_010 Hb_031201_010 Hb_031201_010 Hb_004864_010--Hb_031201_010 Hb_001866_100 Hb_001866_100 Hb_004864_010--Hb_001866_100 Hb_004864_010--Hb_000856_130 Hb_007205_020 Hb_007205_020 Hb_004864_010--Hb_007205_020 Hb_003226_190 Hb_003226_190 Hb_009615_180--Hb_003226_190 Hb_000184_030 Hb_000184_030 Hb_009615_180--Hb_000184_030 Hb_002783_150 Hb_002783_150 Hb_009615_180--Hb_002783_150 Hb_001294_030 Hb_001294_030 Hb_009615_180--Hb_001294_030 Hb_126917_010 Hb_126917_010 Hb_009615_180--Hb_126917_010 Hb_000352_220 Hb_000352_220 Hb_009615_180--Hb_000352_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00460748 0.00414325 0.00385703 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.00999089 0 0.00395993 0.0213625

CAGE analysis