Hb_010697_040

Information

Type -
Description -
Location Contig10697: 28163-29467
Sequence    

Annotation

kegg
ID rcu:RCOM_1313630
description lung seven transmembrane receptor, putative
nr
ID XP_012086617.1
description PREDICTED: protein GPR107 isoform X1 [Jatropha curcas]
swissprot
ID Q8BUV8
description Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2
trembl
ID A0A067JMY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20368 PE=4 SV=1
Gene Ontology
ID GO:0016021
description protein gpr107-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010697_040 0.0 - - PREDICTED: protein GPR107 isoform X1 [Jatropha curcas]
2 Hb_000139_130 0.0787447001 - - PREDICTED: chloride channel protein CLC-d isoform X1 [Jatropha curcas]
3 Hb_008253_020 0.0837606908 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
4 Hb_007508_080 0.0893517937 - - PREDICTED: presenilin-like protein At2g29900 [Jatropha curcas]
5 Hb_001205_110 0.0911727049 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 4 [Jatropha curcas]
6 Hb_000046_070 0.0929187268 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
7 Hb_010712_090 0.0945233364 - - PREDICTED: uncharacterized protein LOC105631276 [Jatropha curcas]
8 Hb_000487_380 0.0957860551 - - PREDICTED: protein PAT1 homolog 1 isoform X1 [Jatropha curcas]
9 Hb_001033_050 0.096452584 - - PREDICTED: acetylornithine deacetylase [Jatropha curcas]
10 Hb_007810_110 0.0973187331 - - PREDICTED: DNA/RNA-binding protein KIN17 [Jatropha curcas]
11 Hb_000780_170 0.1000316487 - - PREDICTED: OBERON-like protein [Jatropha curcas]
12 Hb_003078_020 0.1015995715 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
13 Hb_008103_020 0.1016852566 - - hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
14 Hb_001489_100 0.1031100169 - - PREDICTED: hypersensitive-induced response protein 2 [Jatropha curcas]
15 Hb_007635_030 0.1031834942 - - PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Jatropha curcas]
16 Hb_000757_100 0.1038352347 - - SPla/RYanodine receptor domain-containing protein isoform 2 [Theobroma cacao]
17 Hb_000094_310 0.105045602 - - PREDICTED: uncharacterized membrane protein At1g75140 [Jatropha curcas]
18 Hb_004129_070 0.1052192589 - - PREDICTED: conserved oligomeric Golgi complex subunit 5 [Jatropha curcas]
19 Hb_003430_060 0.1064148618 - - PREDICTED: potassium transporter 23 isoform X2 [Elaeis guineensis]
20 Hb_002276_240 0.1067002391 - - PREDICTED: uncharacterized protein LOC105640682 [Jatropha curcas]

Gene co-expression network

sample Hb_010697_040 Hb_010697_040 Hb_000139_130 Hb_000139_130 Hb_010697_040--Hb_000139_130 Hb_008253_020 Hb_008253_020 Hb_010697_040--Hb_008253_020 Hb_007508_080 Hb_007508_080 Hb_010697_040--Hb_007508_080 Hb_001205_110 Hb_001205_110 Hb_010697_040--Hb_001205_110 Hb_000046_070 Hb_000046_070 Hb_010697_040--Hb_000046_070 Hb_010712_090 Hb_010712_090 Hb_010697_040--Hb_010712_090 Hb_001033_050 Hb_001033_050 Hb_000139_130--Hb_001033_050 Hb_004109_230 Hb_004109_230 Hb_000139_130--Hb_004109_230 Hb_004668_060 Hb_004668_060 Hb_000139_130--Hb_004668_060 Hb_001377_160 Hb_001377_160 Hb_000139_130--Hb_001377_160 Hb_061878_010 Hb_061878_010 Hb_000139_130--Hb_061878_010 Hb_004109_370 Hb_004109_370 Hb_000139_130--Hb_004109_370 Hb_004129_070 Hb_004129_070 Hb_008253_020--Hb_004129_070 Hb_000402_230 Hb_000402_230 Hb_008253_020--Hb_000402_230 Hb_007810_110 Hb_007810_110 Hb_008253_020--Hb_007810_110 Hb_002276_240 Hb_002276_240 Hb_008253_020--Hb_002276_240 Hb_001089_050 Hb_001089_050 Hb_008253_020--Hb_001089_050 Hb_000009_500 Hb_000009_500 Hb_008253_020--Hb_000009_500 Hb_007508_080--Hb_004668_060 Hb_008103_020 Hb_008103_020 Hb_007508_080--Hb_008103_020 Hb_007508_080--Hb_000139_130 Hb_007508_080--Hb_001377_160 Hb_007508_080--Hb_004109_230 Hb_005503_040 Hb_005503_040 Hb_007508_080--Hb_005503_040 Hb_012239_030 Hb_012239_030 Hb_001205_110--Hb_012239_030 Hb_008749_030 Hb_008749_030 Hb_001205_110--Hb_008749_030 Hb_001205_110--Hb_000139_130 Hb_000608_260 Hb_000608_260 Hb_001205_110--Hb_000608_260 Hb_002213_040 Hb_002213_040 Hb_001205_110--Hb_002213_040 Hb_002081_120 Hb_002081_120 Hb_000046_070--Hb_002081_120 Hb_001147_110 Hb_001147_110 Hb_000046_070--Hb_001147_110 Hb_000879_160 Hb_000879_160 Hb_000046_070--Hb_000879_160 Hb_000046_070--Hb_001033_050 Hb_000046_070--Hb_004668_060 Hb_000780_170 Hb_000780_170 Hb_000046_070--Hb_000780_170 Hb_010712_090--Hb_001033_050 Hb_000236_410 Hb_000236_410 Hb_010712_090--Hb_000236_410 Hb_010712_090--Hb_008253_020 Hb_002284_170 Hb_002284_170 Hb_010712_090--Hb_002284_170 Hb_008103_060 Hb_008103_060 Hb_010712_090--Hb_008103_060 Hb_000862_040 Hb_000862_040 Hb_010712_090--Hb_000862_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
124.558 164.184 44.4205 142.479 104.618 102.36
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
49.1754 46.0804 55.69 77.6346 73.4489

CAGE analysis