Hb_010705_040

Information

Type -
Description -
Location Contig10705: 70826-84784
Sequence    

Annotation

kegg
ID rcu:RCOM_0769480
description kinesin heavy chain, putative
nr
ID XP_012086202.1
description PREDICTED: kinesin-4 [Jatropha curcas]
swissprot
ID O81635
description Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
trembl
ID B9T5B8
description Kinesin-like protein OS=Ricinus communis GN=RCOM_0769480 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin kp1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02234: 75866-76583 , PASA_asmbl_02235: 76605-77148 , PASA_asmbl_02236: 77930-78840 , PASA_asmbl_02237: 78890-80273
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010705_040 0.0 - - PREDICTED: kinesin-4 [Jatropha curcas]
2 Hb_000364_140 0.0941907844 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
3 Hb_000441_210 0.0944034118 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
4 Hb_004963_020 0.0977606395 - - PREDICTED: patellin-4 [Populus euphratica]
5 Hb_004102_090 0.0985251871 transcription factor TF Family: CPP hypothetical protein JCGZ_06186 [Jatropha curcas]
6 Hb_002205_180 0.0993492179 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
7 Hb_000265_100 0.0994270303 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
8 Hb_000069_510 0.0994665605 - - PREDICTED: histone H3-like centromeric protein HTR12 [Jatropha curcas]
9 Hb_002232_310 0.1007276654 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
10 Hb_001168_030 0.1011398666 - - PREDICTED: G2/mitotic-specific cyclin S13-7 [Jatropha curcas]
11 Hb_014497_070 0.1034584561 - - PREDICTED: cyclin-dependent kinase B2-2 [Jatropha curcas]
12 Hb_008725_240 0.1053371365 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000316_070 0.106820374 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]
14 Hb_101133_050 0.1075905823 - - PREDICTED: condensin complex subunit 3 [Jatropha curcas]
15 Hb_002473_030 0.1080933187 - - PREDICTED: osmotic avoidance abnormal protein 3 [Jatropha curcas]
16 Hb_000028_530 0.11119865 - - Protein regulator of cytokinesis, putative [Ricinus communis]
17 Hb_080952_060 0.1121599202 - - PREDICTED: patellin-4 [Populus euphratica]
18 Hb_000936_030 0.113479546 - - hypothetical protein RCOM_0615680 [Ricinus communis]
19 Hb_001998_180 0.1158750784 - - actin binding protein, putative [Ricinus communis]
20 Hb_003776_050 0.1160122551 - - PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]

Gene co-expression network

sample Hb_010705_040 Hb_010705_040 Hb_000364_140 Hb_000364_140 Hb_010705_040--Hb_000364_140 Hb_000441_210 Hb_000441_210 Hb_010705_040--Hb_000441_210 Hb_004963_020 Hb_004963_020 Hb_010705_040--Hb_004963_020 Hb_004102_090 Hb_004102_090 Hb_010705_040--Hb_004102_090 Hb_002205_180 Hb_002205_180 Hb_010705_040--Hb_002205_180 Hb_000265_100 Hb_000265_100 Hb_010705_040--Hb_000265_100 Hb_002473_030 Hb_002473_030 Hb_000364_140--Hb_002473_030 Hb_000364_140--Hb_004963_020 Hb_004032_390 Hb_004032_390 Hb_000364_140--Hb_004032_390 Hb_001699_090 Hb_001699_090 Hb_000364_140--Hb_001699_090 Hb_001168_030 Hb_001168_030 Hb_000364_140--Hb_001168_030 Hb_000441_210--Hb_004963_020 Hb_000441_210--Hb_004102_090 Hb_001454_180 Hb_001454_180 Hb_000441_210--Hb_001454_180 Hb_000441_210--Hb_002205_180 Hb_000441_210--Hb_001168_030 Hb_004963_020--Hb_002473_030 Hb_000316_070 Hb_000316_070 Hb_004963_020--Hb_000316_070 Hb_004963_020--Hb_001168_030 Hb_001864_040 Hb_001864_040 Hb_004963_020--Hb_001864_040 Hb_002837_030 Hb_002837_030 Hb_004963_020--Hb_002837_030 Hb_005649_050 Hb_005649_050 Hb_004963_020--Hb_005649_050 Hb_004102_090--Hb_002205_180 Hb_004102_090--Hb_004963_020 Hb_004102_090--Hb_000316_070 Hb_006520_030 Hb_006520_030 Hb_004102_090--Hb_006520_030 Hb_000189_350 Hb_000189_350 Hb_004102_090--Hb_000189_350 Hb_002205_180--Hb_000189_350 Hb_002205_180--Hb_006520_030 Hb_033152_060 Hb_033152_060 Hb_002205_180--Hb_033152_060 Hb_000028_530 Hb_000028_530 Hb_000265_100--Hb_000028_530 Hb_000334_120 Hb_000334_120 Hb_000265_100--Hb_000334_120 Hb_002374_090 Hb_002374_090 Hb_000265_100--Hb_002374_090 Hb_000265_100--Hb_004963_020 Hb_000265_100--Hb_002473_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0241642 0.0925057 4.04508 1.47663 0.0181383 0.0586419
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0273915 0.0538882 0.0412699 0.162389 0.276208

CAGE analysis