Hb_010710_080

Information

Type -
Description -
Location Contig10710: 44428-47561
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010710_080 0.0 - - -
2 Hb_002909_050 0.0747962967 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000041_280 0.0879240994 - - PREDICTED: probable protein arginine N-methyltransferase 6 [Jatropha curcas]
4 Hb_001136_090 0.0971153864 - - Protein PNS1, putative [Ricinus communis]
5 Hb_001623_480 0.0988338225 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Jatropha curcas]
6 Hb_011512_060 0.101059097 - - PREDICTED: chaperonin CPN60-2, mitochondrial [Jatropha curcas]
7 Hb_000574_440 0.1013380185 - - PREDICTED: uncharacterized protein LOC105634833 [Jatropha curcas]
8 Hb_000160_210 0.1029111724 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002890_020 0.1038257977 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 5 isoform X1 [Jatropha curcas]
10 Hb_000320_200 0.1040804438 - - PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Jatropha curcas]
11 Hb_003952_150 0.104336019 - - PREDICTED: cactin [Jatropha curcas]
12 Hb_000207_180 0.1050220439 - - PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Jatropha curcas]
13 Hb_006449_050 0.1051493849 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX2-like [Jatropha curcas]
14 Hb_007307_020 0.1052835698 - - DNA binding protein, putative [Ricinus communis]
15 Hb_009503_030 0.1081626727 - - protein dimerization, putative [Ricinus communis]
16 Hb_002311_450 0.1084024904 - - PREDICTED: acyl-CoA dehydrogenase family member 10 [Jatropha curcas]
17 Hb_008024_030 0.1088393788 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105648348 [Jatropha curcas]
18 Hb_000856_140 0.1103479751 - - PREDICTED: uncharacterized protein LOC105640478 isoform X1 [Jatropha curcas]
19 Hb_000920_210 0.1103850666 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]
20 Hb_000665_160 0.1114016688 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_010710_080 Hb_010710_080 Hb_002909_050 Hb_002909_050 Hb_010710_080--Hb_002909_050 Hb_000041_280 Hb_000041_280 Hb_010710_080--Hb_000041_280 Hb_001136_090 Hb_001136_090 Hb_010710_080--Hb_001136_090 Hb_001623_480 Hb_001623_480 Hb_010710_080--Hb_001623_480 Hb_011512_060 Hb_011512_060 Hb_010710_080--Hb_011512_060 Hb_000574_440 Hb_000574_440 Hb_010710_080--Hb_000574_440 Hb_000076_130 Hb_000076_130 Hb_002909_050--Hb_000076_130 Hb_000665_160 Hb_000665_160 Hb_002909_050--Hb_000665_160 Hb_000544_010 Hb_000544_010 Hb_002909_050--Hb_000544_010 Hb_001599_030 Hb_001599_030 Hb_002909_050--Hb_001599_030 Hb_006915_070 Hb_006915_070 Hb_002909_050--Hb_006915_070 Hb_000041_280--Hb_001136_090 Hb_001493_030 Hb_001493_030 Hb_000041_280--Hb_001493_030 Hb_000463_140 Hb_000463_140 Hb_000041_280--Hb_000463_140 Hb_009627_010 Hb_009627_010 Hb_000041_280--Hb_009627_010 Hb_003052_150 Hb_003052_150 Hb_000041_280--Hb_003052_150 Hb_000041_280--Hb_000574_440 Hb_001136_100 Hb_001136_100 Hb_001136_090--Hb_001136_100 Hb_002367_130 Hb_002367_130 Hb_001136_090--Hb_002367_130 Hb_012132_030 Hb_012132_030 Hb_001136_090--Hb_012132_030 Hb_001502_060 Hb_001502_060 Hb_001136_090--Hb_001502_060 Hb_000072_350 Hb_000072_350 Hb_001136_090--Hb_000072_350 Hb_008024_030 Hb_008024_030 Hb_001623_480--Hb_008024_030 Hb_000920_210 Hb_000920_210 Hb_001623_480--Hb_000920_210 Hb_004920_090 Hb_004920_090 Hb_001623_480--Hb_004920_090 Hb_000740_100 Hb_000740_100 Hb_001623_480--Hb_000740_100 Hb_000109_100 Hb_000109_100 Hb_001623_480--Hb_000109_100 Hb_104061_020 Hb_104061_020 Hb_001623_480--Hb_104061_020 Hb_009558_040 Hb_009558_040 Hb_011512_060--Hb_009558_040 Hb_000856_140 Hb_000856_140 Hb_011512_060--Hb_000856_140 Hb_000714_050 Hb_000714_050 Hb_011512_060--Hb_000714_050 Hb_010315_090 Hb_010315_090 Hb_011512_060--Hb_010315_090 Hb_008595_010 Hb_008595_010 Hb_011512_060--Hb_008595_010 Hb_006449_050 Hb_006449_050 Hb_011512_060--Hb_006449_050 Hb_009503_030 Hb_009503_030 Hb_000574_440--Hb_009503_030 Hb_000084_250 Hb_000084_250 Hb_000574_440--Hb_000084_250 Hb_002221_050 Hb_002221_050 Hb_000574_440--Hb_002221_050 Hb_027380_140 Hb_027380_140 Hb_000574_440--Hb_027380_140 Hb_006831_110 Hb_006831_110 Hb_000574_440--Hb_006831_110 Hb_000768_070 Hb_000768_070 Hb_000574_440--Hb_000768_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.7784 7.94607 6.21383 2.65528 16.5798 9.5018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.70667 5.60143 7.71284 10.3705 10.1491

CAGE analysis