Hb_010710_110

Information

Type -
Description -
Location Contig10710: 69102-74561
Sequence    

Annotation

kegg
ID mus:103997323
description uncharacterized protein LOC103997323
nr
ID XP_009416774.1
description PREDICTED: uncharacterized protein LOC103997323 [Musa acuminata subsp. malaccensis]
swissprot
ID Q9M345
description L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1
trembl
ID B9S3F4
description Kinase, putative OS=Ricinus communis GN=RCOM_0733210 PE=3 SV=1
Gene Ontology
ID GO:0004693
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010710_110 0.0 - - PREDICTED: uncharacterized protein LOC103997323 [Musa acuminata subsp. malaccensis]
2 Hb_000009_550 0.0743929566 - - hypothetical protein RCOM_0603640 [Ricinus communis]
3 Hb_005307_030 0.0776827399 - - hypothetical protein POPTR_0006s04640g [Populus trichocarpa]
4 Hb_000787_110 0.0779881815 - - eukaryotic translation initiation factor 2 [Hevea brasiliensis]
5 Hb_004934_090 0.0799998704 - - hypothetical protein JCGZ_08073 [Jatropha curcas]
6 Hb_000923_020 0.0800203491 - - PREDICTED: ankyrin repeat domain-containing protein 65-like [Jatropha curcas]
7 Hb_001720_050 0.0817121348 - - PREDICTED: ATPase family AAA domain-containing protein At1g05910 isoform X1 [Jatropha curcas]
8 Hb_000554_020 0.0823692053 - - PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like [Jatropha curcas]
9 Hb_000224_170 0.0829545575 - - hypothetical protein JCGZ_13777 [Jatropha curcas]
10 Hb_003777_330 0.0834089899 - - ribonucleoside-diphosphate reductase large chain, putative [Ricinus communis]
11 Hb_181235_010 0.0847247682 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105645554 isoform X2 [Jatropha curcas]
12 Hb_007364_010 0.0856756949 - - PREDICTED: general transcription factor 3C polypeptide 3-like isoform X1 [Jatropha curcas]
13 Hb_000815_210 0.0864153538 - - uncoupling protein 3, partial [Manihot esculenta]
14 Hb_000943_070 0.0864843629 - - PREDICTED: uncharacterized protein LOC105635592 isoform X1 [Jatropha curcas]
15 Hb_000661_050 0.0875834529 - - PREDICTED: ankyrin repeat domain-containing protein 13C-like [Jatropha curcas]
16 Hb_005245_130 0.0875998016 - - PREDICTED: uncharacterized protein LOC105643730 [Jatropha curcas]
17 Hb_000188_100 0.0880678548 - - PREDICTED: protein YIPF5 homolog [Jatropha curcas]
18 Hb_015941_030 0.0895962679 - - unknown [Populus trichocarpa]
19 Hb_001811_150 0.0902232107 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like isoform X2 [Jatropha curcas]
20 Hb_003406_010 0.090660632 - - putative ATP-dependent RNA helicase DHX36 [Morus notabilis]

Gene co-expression network

sample Hb_010710_110 Hb_010710_110 Hb_000009_550 Hb_000009_550 Hb_010710_110--Hb_000009_550 Hb_005307_030 Hb_005307_030 Hb_010710_110--Hb_005307_030 Hb_000787_110 Hb_000787_110 Hb_010710_110--Hb_000787_110 Hb_004934_090 Hb_004934_090 Hb_010710_110--Hb_004934_090 Hb_000923_020 Hb_000923_020 Hb_010710_110--Hb_000923_020 Hb_001720_050 Hb_001720_050 Hb_010710_110--Hb_001720_050 Hb_029584_080 Hb_029584_080 Hb_000009_550--Hb_029584_080 Hb_000009_550--Hb_000923_020 Hb_000009_550--Hb_005307_030 Hb_003097_150 Hb_003097_150 Hb_000009_550--Hb_003097_150 Hb_015941_030 Hb_015941_030 Hb_000009_550--Hb_015941_030 Hb_002027_260 Hb_002027_260 Hb_005307_030--Hb_002027_260 Hb_001141_330 Hb_001141_330 Hb_005307_030--Hb_001141_330 Hb_000953_010 Hb_000953_010 Hb_005307_030--Hb_000953_010 Hb_004324_280 Hb_004324_280 Hb_005307_030--Hb_004324_280 Hb_000803_190 Hb_000803_190 Hb_005307_030--Hb_000803_190 Hb_000188_100 Hb_000188_100 Hb_000787_110--Hb_000188_100 Hb_000554_020 Hb_000554_020 Hb_000787_110--Hb_000554_020 Hb_000406_220 Hb_000406_220 Hb_000787_110--Hb_000406_220 Hb_002810_020 Hb_002810_020 Hb_000787_110--Hb_002810_020 Hb_001488_330 Hb_001488_330 Hb_000787_110--Hb_001488_330 Hb_002097_090 Hb_002097_090 Hb_004934_090--Hb_002097_090 Hb_004096_030 Hb_004096_030 Hb_004934_090--Hb_004096_030 Hb_005245_130 Hb_005245_130 Hb_004934_090--Hb_005245_130 Hb_002030_030 Hb_002030_030 Hb_004934_090--Hb_002030_030 Hb_000803_300 Hb_000803_300 Hb_004934_090--Hb_000803_300 Hb_003994_240 Hb_003994_240 Hb_004934_090--Hb_003994_240 Hb_003777_330 Hb_003777_330 Hb_000923_020--Hb_003777_330 Hb_000099_240 Hb_000099_240 Hb_000923_020--Hb_000099_240 Hb_004223_090 Hb_004223_090 Hb_000923_020--Hb_004223_090 Hb_002375_020 Hb_002375_020 Hb_000923_020--Hb_002375_020 Hb_001377_290 Hb_001377_290 Hb_000923_020--Hb_001377_290 Hb_000621_080 Hb_000621_080 Hb_000923_020--Hb_000621_080 Hb_001720_050--Hb_003777_330 Hb_000421_260 Hb_000421_260 Hb_001720_050--Hb_000421_260 Hb_000418_100 Hb_000418_100 Hb_001720_050--Hb_000418_100 Hb_033642_010 Hb_033642_010 Hb_001720_050--Hb_033642_010 Hb_002890_340 Hb_002890_340 Hb_001720_050--Hb_002890_340 Hb_000152_820 Hb_000152_820 Hb_001720_050--Hb_000152_820
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.0818 12.0395 3.23107 4.59324 17.8481 19.5293
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.9387 14.0496 13.7898 5.33526 4.92868

CAGE analysis