Hb_010721_010

Information

Type -
Description -
Location Contig10721: 27678-28744
Sequence    

Annotation

kegg
ID rcu:RCOM_0985130
description metal ion binding protein, putative
nr
ID XP_011039548.1
description PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
swissprot
ID Q9SZN7
description Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
trembl
ID B9SSL2
description Metal ion binding protein, putative OS=Ricinus communis GN=RCOM_0985130 PE=4 SV=1
Gene Ontology
ID GO:0046872
description heavy metal-associated isoprenylated plant protein 26-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02288: 27357-28585
cDNA
(Sanger)
(ID:Location)		 017_K01.ab1: 27368-27988

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010721_010 0.0 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
2 Hb_023386_060 0.0857534622 - - PREDICTED: putative glucuronosyltransferase PGSIP8 [Jatropha curcas]
3 Hb_002048_070 0.1023332954 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
4 Hb_001430_010 0.1023778829 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
5 Hb_002676_110 0.1039552685 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Gossypium raimondii]
6 Hb_011915_020 0.1047877683 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
7 Hb_001663_090 0.1078532634 - - ribonuclease t2, putative [Ricinus communis]
8 Hb_029622_090 0.1127994378 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
9 Hb_076771_010 0.1172029385 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
10 Hb_012272_010 0.1196679647 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
11 Hb_070634_010 0.121320403 - - TMV resistance protein N, putative [Ricinus communis]
12 Hb_001610_070 0.1258089992 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
13 Hb_005048_120 0.1259763662 - - -
14 Hb_001198_160 0.1264053764 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
15 Hb_160653_010 0.1278903229 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
16 Hb_001019_020 0.1328352728 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001247_160 0.1333049839 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
18 Hb_091826_020 0.1335526824 - - hypothetical protein JCGZ_04975 [Jatropha curcas]
19 Hb_138086_010 0.1341634508 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
20 Hb_000028_330 0.135303722 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]

Gene co-expression network

sample Hb_010721_010 Hb_010721_010 Hb_023386_060 Hb_023386_060 Hb_010721_010--Hb_023386_060 Hb_002048_070 Hb_002048_070 Hb_010721_010--Hb_002048_070 Hb_001430_010 Hb_001430_010 Hb_010721_010--Hb_001430_010 Hb_002676_110 Hb_002676_110 Hb_010721_010--Hb_002676_110 Hb_011915_020 Hb_011915_020 Hb_010721_010--Hb_011915_020 Hb_001663_090 Hb_001663_090 Hb_010721_010--Hb_001663_090 Hb_023386_060--Hb_002048_070 Hb_000465_350 Hb_000465_350 Hb_023386_060--Hb_000465_350 Hb_023386_060--Hb_001430_010 Hb_023386_060--Hb_011915_020 Hb_023386_060--Hb_001663_090 Hb_002048_070--Hb_000465_350 Hb_029622_090 Hb_029622_090 Hb_002048_070--Hb_029622_090 Hb_002048_070--Hb_001663_090 Hb_002048_070--Hb_011915_020 Hb_160653_010 Hb_160653_010 Hb_001430_010--Hb_160653_010 Hb_015037_010 Hb_015037_010 Hb_001430_010--Hb_015037_010 Hb_001430_010--Hb_011915_020 Hb_002048_100 Hb_002048_100 Hb_001430_010--Hb_002048_100 Hb_002676_110--Hb_001663_090 Hb_076771_010 Hb_076771_010 Hb_002676_110--Hb_076771_010 Hb_000060_080 Hb_000060_080 Hb_002676_110--Hb_000060_080 Hb_004631_100 Hb_004631_100 Hb_002676_110--Hb_004631_100 Hb_070634_010 Hb_070634_010 Hb_002676_110--Hb_070634_010 Hb_001610_070 Hb_001610_070 Hb_011915_020--Hb_001610_070 Hb_002374_030 Hb_002374_030 Hb_011915_020--Hb_002374_030 Hb_011915_020--Hb_029622_090 Hb_001198_160 Hb_001198_160 Hb_011915_020--Hb_001198_160 Hb_001663_090--Hb_029622_090 Hb_000028_330 Hb_000028_330 Hb_001663_090--Hb_000028_330 Hb_002739_160 Hb_002739_160 Hb_001663_090--Hb_002739_160 Hb_001663_090--Hb_000060_080 Hb_030827_080 Hb_030827_080 Hb_001663_090--Hb_030827_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.77574 55.1026 47.2882 48.3226 0.204786 0.0205904
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.374805 0.21055 0 7.00163 4.80854

CAGE analysis