Hb_010738_020

Information

Type -
Description -
Location Contig10738: 18871-19755
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q9ZPS9
description Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010738_020 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_000186_160 0.1157726582 - - hypothetical protein POPTR_0011s01120g [Populus trichocarpa]
3 Hb_011214_080 0.1204002602 - - sucrose synthase 1 [Hevea brasiliensis]
4 Hb_000220_060 0.1240680767 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 15 [Jatropha curcas]
5 Hb_000340_240 0.1324699956 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012760_120 0.1348939698 - - PREDICTED: peroxidase 64-like [Jatropha curcas]
7 Hb_018487_040 0.1403178626 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
8 Hb_007534_080 0.1403560222 - - d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
9 Hb_189208_080 0.1405974553 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 11-like isoform X1 [Jatropha curcas]
10 Hb_002250_040 0.140773098 - - PREDICTED: transcription repressor OFP17 [Jatropha curcas]
11 Hb_169492_010 0.1411057286 - - PREDICTED: expansin-like B1 [Jatropha curcas]
12 Hb_002675_220 0.142348109 - - PREDICTED: probable pyridoxal biosynthesis protein PDX1.2 [Populus euphratica]
13 Hb_000363_070 0.1427046238 - - conserved hypothetical protein [Ricinus communis]
14 Hb_029622_060 0.1456982154 - - PREDICTED: putative lipase ROG1 isoform X1 [Jatropha curcas]
15 Hb_006718_030 0.1458129862 - - ATPase, F1 complex, gamma subunit protein [Theobroma cacao]
16 Hb_000883_080 0.1459710022 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_005483_040 0.1469842592 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
18 Hb_000815_120 0.1471917692 - - calcium ion binding protein, putative [Ricinus communis]
19 Hb_002329_050 0.1472379914 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001097_110 0.1472939427 - - gibberellin 20-oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_010738_020 Hb_010738_020 Hb_000186_160 Hb_000186_160 Hb_010738_020--Hb_000186_160 Hb_011214_080 Hb_011214_080 Hb_010738_020--Hb_011214_080 Hb_000220_060 Hb_000220_060 Hb_010738_020--Hb_000220_060 Hb_000340_240 Hb_000340_240 Hb_010738_020--Hb_000340_240 Hb_012760_120 Hb_012760_120 Hb_010738_020--Hb_012760_120 Hb_018487_040 Hb_018487_040 Hb_010738_020--Hb_018487_040 Hb_029622_060 Hb_029622_060 Hb_000186_160--Hb_029622_060 Hb_003787_030 Hb_003787_030 Hb_000186_160--Hb_003787_030 Hb_000815_120 Hb_000815_120 Hb_000186_160--Hb_000815_120 Hb_123689_010 Hb_123689_010 Hb_000186_160--Hb_123689_010 Hb_006573_240 Hb_006573_240 Hb_000186_160--Hb_006573_240 Hb_002301_070 Hb_002301_070 Hb_000186_160--Hb_002301_070 Hb_000538_110 Hb_000538_110 Hb_011214_080--Hb_000538_110 Hb_189208_080 Hb_189208_080 Hb_011214_080--Hb_189208_080 Hb_011214_080--Hb_012760_120 Hb_011214_080--Hb_018487_040 Hb_002250_040 Hb_002250_040 Hb_011214_080--Hb_002250_040 Hb_002675_220 Hb_002675_220 Hb_011214_080--Hb_002675_220 Hb_000220_060--Hb_189208_080 Hb_003038_070 Hb_003038_070 Hb_000220_060--Hb_003038_070 Hb_000220_060--Hb_000340_240 Hb_000220_060--Hb_011214_080 Hb_001105_150 Hb_001105_150 Hb_000220_060--Hb_001105_150 Hb_001959_100 Hb_001959_100 Hb_000340_240--Hb_001959_100 Hb_000340_240--Hb_012760_120 Hb_000340_240--Hb_000538_110 Hb_000340_240--Hb_011214_080 Hb_012760_120--Hb_000538_110 Hb_012760_120--Hb_018487_040 Hb_001488_160 Hb_001488_160 Hb_012760_120--Hb_001488_160 Hb_005483_040 Hb_005483_040 Hb_012760_120--Hb_005483_040 Hb_002044_070 Hb_002044_070 Hb_012760_120--Hb_002044_070 Hb_018487_040--Hb_002675_220 Hb_018487_040--Hb_002250_040 Hb_001104_070 Hb_001104_070 Hb_018487_040--Hb_001104_070 Hb_018487_040--Hb_005483_040 Hb_002329_050 Hb_002329_050 Hb_018487_040--Hb_002329_050 Hb_080048_030 Hb_080048_030 Hb_018487_040--Hb_080048_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0215381 0.340259 0.786859 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0465135 0.0848639 0.0187663 2.73317

CAGE analysis