Hb_010770_010

Information

Type -
Description -
Location Contig10770: 11702-19996
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010770_010 0.0 - - -
2 Hb_176844_010 0.1754271534 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_012384_050 0.210010352 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
4 Hb_087221_010 0.2185359349 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
5 Hb_073212_010 0.2410612528 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
6 Hb_007382_040 0.2428118294 - - uncharacterized LOC105644857 [Jatropha curcas]
7 Hb_000046_410 0.2499755011 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
8 Hb_003534_040 0.2584589698 - - hypothetical protein POPTR_0009s14420g [Populus trichocarpa]
9 Hb_000139_200 0.2630532281 - - catalytic, putative [Ricinus communis]
10 Hb_002192_070 0.2671793534 - - -
11 Hb_162286_020 0.2672332662 - - PREDICTED: uncharacterized protein LOC105642702 [Jatropha curcas]
12 Hb_000815_140 0.2680209973 - - cytochrome P450, putative [Ricinus communis]
13 Hb_007805_020 0.2688234409 - - -
14 Hb_000365_260 0.2706686702 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004007_150 0.2732009723 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 4 [Jatropha curcas]
16 Hb_137543_010 0.2740278969 - - -
17 Hb_000815_100 0.2764611754 - - -
18 Hb_001677_050 0.2779402908 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
19 Hb_000313_320 0.2783255686 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
20 Hb_003064_030 0.2816286501 - - bromodomain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_010770_010 Hb_010770_010 Hb_176844_010 Hb_176844_010 Hb_010770_010--Hb_176844_010 Hb_012384_050 Hb_012384_050 Hb_010770_010--Hb_012384_050 Hb_087221_010 Hb_087221_010 Hb_010770_010--Hb_087221_010 Hb_073212_010 Hb_073212_010 Hb_010770_010--Hb_073212_010 Hb_007382_040 Hb_007382_040 Hb_010770_010--Hb_007382_040 Hb_000046_410 Hb_000046_410 Hb_010770_010--Hb_000046_410 Hb_000815_140 Hb_000815_140 Hb_176844_010--Hb_000815_140 Hb_176844_010--Hb_000046_410 Hb_013877_020 Hb_013877_020 Hb_176844_010--Hb_013877_020 Hb_176844_010--Hb_012384_050 Hb_176844_010--Hb_087221_010 Hb_012384_050--Hb_073212_010 Hb_000365_260 Hb_000365_260 Hb_012384_050--Hb_000365_260 Hb_006615_100 Hb_006615_100 Hb_012384_050--Hb_006615_100 Hb_003064_030 Hb_003064_030 Hb_012384_050--Hb_003064_030 Hb_012384_050--Hb_000815_140 Hb_012384_050--Hb_087221_010 Hb_087221_010--Hb_073212_010 Hb_020549_010 Hb_020549_010 Hb_087221_010--Hb_020549_010 Hb_000733_040 Hb_000733_040 Hb_087221_010--Hb_000733_040 Hb_088542_010 Hb_088542_010 Hb_073212_010--Hb_088542_010 Hb_004007_150 Hb_004007_150 Hb_073212_010--Hb_004007_150 Hb_000605_010 Hb_000605_010 Hb_073212_010--Hb_000605_010 Hb_001691_050 Hb_001691_050 Hb_073212_010--Hb_001691_050 Hb_001632_010 Hb_001632_010 Hb_073212_010--Hb_001632_010 Hb_002609_100 Hb_002609_100 Hb_007382_040--Hb_002609_100 Hb_001259_030 Hb_001259_030 Hb_007382_040--Hb_001259_030 Hb_003050_090 Hb_003050_090 Hb_007382_040--Hb_003050_090 Hb_000613_020 Hb_000613_020 Hb_007382_040--Hb_000613_020 Hb_060437_010 Hb_060437_010 Hb_007382_040--Hb_060437_010 Hb_004254_040 Hb_004254_040 Hb_007382_040--Hb_004254_040 Hb_000046_410--Hb_000815_140 Hb_000046_410--Hb_012384_050 Hb_000028_160 Hb_000028_160 Hb_000046_410--Hb_000028_160 Hb_004361_050 Hb_004361_050 Hb_000046_410--Hb_004361_050 Hb_001138_010 Hb_001138_010 Hb_000046_410--Hb_001138_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.13707 0.690854 0.169713 0.106222 0.884053 0.694408
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.163714 0.257185 0 0.162477 0.233528

CAGE analysis